KEGG   Vairimorpha ceranae: NCER_100861
Entry
NCER_100861       CDS       T01614                                 
Name
(GenBank) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
nce  Vairimorpha ceranae
Pathway
nce03082  ATP-dependent chromatin remodeling
nce03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nce00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    NCER_100861
   03083 Polycomb repressive complex
    NCER_100861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nce03036]
    NCER_100861
Chromosome and associated proteins [BR:nce03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     NCER_100861
  Histone modification proteins
   HAT complexes
    HATB complex
     NCER_100861
   HDAC complexes
    Sin3A-HDAC complex
     NCER_100861
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     NCER_100861
    PRC2.2
     NCER_100861
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     NCER_100861
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    NCER_100861
  Chromatin remodeling factors
   NuRD complex
    NCER_100861
   NuRF complex
    NCER_100861
   NuRF complex (fruit fly)
    NCER_100861
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_EML EIF3I WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st CAT Beta-prop_RIG_1st
Other DBs
NCBI-ProteinID: EEQ82426
UniProt: C4V8M9
LinkDB
AA seq 384 aa
MIEREYYDNEVFEEHNVWRKNVPYMYDLMFSYALKWPSLSVQYFPDSRRDDRKESTSQRL
LLSTNTNGEEQEYIHIASVEFPDKYDELLSDDCNGDLRFKFEQSIPVHSSINVVRYNPVA
FHLLAARFDTEDIHIFDYTKHLATSEYAEPDVVLKGHSKGGYGLCWNPLITSELATAGED
NKICIFNITESSKNIRATTKLKYHSKIVNEISYNYNNDTVLASVSDDKSLIIWDTKIKKP
SYVVSDAHESDILSCHFSPLNSFYLATSSEDRSVKIWDTRNLSTSVYTLLRHSSGCGKVQ
WSPHFESILASAGKDKRVCMWDLSLYGNILSEEDALDGPPELMFLHGGHTDNVVDISWNP
AEIYEIASVSEDNVLQIWQIPERE
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgatagaacgagaatattatgataacgaagttttcgaagaacataatgtatggagaaaa
aatgtaccatacatgtatgatttaatgttctcttacgccttaaagtggccttctttgtca
gtacaatattttcctgatagtagaagagatgatagaaaagaaagcacttctcaaagattg
ttacttagcaccaacaccaatggtgaagaacaagaatatattcatattgcatctgtcgag
tttcctgataaatatgatgaattgttaagtgatgattgtaatggagatctaagatttaaa
tttgaacagtctataccagtgcacagttcaattaatgttgttaggtacaatcctgtagca
tttcatttacttgctgctagatttgacacagaagacattcacatatttgattatactaaa
catttagcaacaagtgaatatgctgaacctgatgttgtgctaaaaggtcattctaagggg
ggttatggattatgctggaatccgcttattacttctgaacttgctacagcgggagaagat
aataaaatctgtatttttaatattacagaatctagtaaaaatataagagctactactaaa
ttaaaatatcattcaaagattgtaaatgaaatatcatataattacaataatgacactgtt
cttgcatcagtgagtgacgacaagtctttgataatttgggatacaaaaataaaaaagcct
agttatgttgtgtccgacgcacatgaatctgatattttatcctgccatttttcaccgtta
aattcgttttatttggctactagctctgaggacagatcggtgaaaatatgggatacaaga
aatctcagtacttctgtttacactttgctaagacactctagtgggtgtggaaaagtccag
tggtctccacatttcgaaagcatattggcatcggctggcaaagataagcgcgtttgtatg
tgggatttgtcactttacggaaatattttatcagaagaagatgctttagatggtcctccc
gaattaatgtttttacatgggggacacactgataatgttgttgatatttcgtggaatcct
gcagagatttatgagattgcgagtgtttctgaagacaatgtcttgcaaatctggcaaata
ccagaaagagaataa

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