Vairimorpha ceranae: NCER_100895
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Entry
NCER_100895 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nce
Vairimorpha ceranae
Pathway
nce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCER_100895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nce03041
]
NCER_100895
03009 Ribosome biogenesis [BR:
nce03009
]
NCER_100895
Enzymes [BR:
nce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCER_100895
Spliceosome [BR:
nce03041
]
Complex A
U1 snRNP components
U1 related factors
NCER_100895
Complex B
NCER_100895
Ribosome biogenesis [BR:
nce03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCER_100895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EEQ82394
UniProt:
C4V8Q7
LinkDB
All DBs
AA seq
528 aa
AA seq
DB search
MSYGNNDNYNGSYRSQKKSWRDDNDDKLQKGNRAYKNNTFSRGDSWYGGNSRPLSNRSSG
WTSNKSVSWTPGRSESRPAFELKPALGAVEFKKDFYKKTDNLTDREADNFRNQHDIKISG
DVPHPYVKFEHAPFENEVLNNFKLKAFTSPTPIQAQGWPMALTGKDMVGIAQTGSGKTLS
FVLPALIHARAQIPLRSGDGPIVLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGVSS
YTQKRDISMGCEVVVGCPGRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKIIV
NTNPDRQTLMWSATWPKEVRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDSHEKAN
KLHESLNEKKNEKVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISDFRSG
YKNILIATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFFTSEN
SACAKELVKILKEANQDVPSKLIDMSTTKNGGYNSRGGNYSRPYRSWY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacggtaacaacgataattacaacggtagttatagaagccagaaaaaatcttgg
cgtgatgataatgatgataaattacaaaagggaaatagagcatataaaaacaatactttt
tctagaggagatagttggtatggtggaaattcaaggccattatcaaacagatcaagtgga
tggacctctaataaaagtgtttcttggacaccaggtagaagtgagtcacggccggcattt
gaattaaaaccagctcttggtgctgtagaatttaaaaaagatttttacaaaaaaaccgat
aatttaaccgacagagaagcagataattttagaaatcaacatgatattaaaatttctgga
gatgtaccacatccctatgttaaattcgaacatgcaccctttgaaaatgaggtgttaaat
aattttaaactaaaagcttttactagtccaacgcctatacaagcgcaggggtggccgatg
gcactcacaggaaaggatatggttggaatagcgcagactggaagcggcaaaacacttagt
tttgtactaccagcactcattcatgctagagctcagattcctttaagatctggagatggt
cctattgttttagttttagcacccactagggagttgtgtcttcaaattaaagatgtgttt
gatgaatattgcagattttttaatatgagatgtactgctgtttatggaggagtatcttca
tatacacaaaaaagagatatcagtatgggatgtgaagtagttgttggatgtccagggaga
cttattgacttgaatgaacaaggagctttgcattttaacagggttacttttttggttcta
gatgaagcggatagaatgcttgatatgggattcgaacctcaactaaaaaagattatagtt
aatacgaatcctgatcgacagactcttatgtggagtgctacgtggccaaaagaggttagg
cggttagcagaaaattatatgaagaattttgtacaattaacaattggtagtgtagaactt
aaaactaatattaaaattaagcaaattgtttctgttattgattctcatgaaaaagctaat
aaattacatgagtcattaaatgaaaagaaaaatgaaaaagttattatctttgctaatact
aaaagaatgtgtgataatctcgaggatgatttatcacgaagaggatacaaagcagttgct
attcatggcgataaatcgcagaatattcgtgatcgtataattagtgatttcagatctggt
tataaaaatattttaatagctacagatgtagcagctagaggattggatattaaaaatgta
gctttagtaataaactatgactttccaaataatatcgaagattatgtacaccgaattgga
cgtacagctagaggagatgtaactgaaggattgtctcattcattttttacctcagaaaat
agcgcctgtgctaaagaattagtgaagattcttaaagaagctaatcaagatgttccatct
aagttaatagacatgtctactacaaaaaatggtggttataatagcagaggaggaaattat
agcagaccatatagaagctggtattga
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