KEGG   Vairimorpha ceranae: NCER_101007
Entry
NCER_101007       CDS       T01614                                 
Name
(GenBank) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nce  Vairimorpha ceranae
Pathway
nce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCER_101007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nce03019]
    NCER_101007
Messenger RNA biogenesis [BR:nce03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     NCER_101007
SSDB
Motif
Pfam: HRDC
Other DBs
NCBI-ProteinID: EEQ82295
UniProt: C4V8Z9
LinkDB
AA seq 371 aa
MKNLANLAKQFITQLNKTINVSNASKPDKCYYKEVLDNIRKLKPYFAFDEVSITNCIESS
NIKIDKKNILALIYENEIKAIIGKYCQSYKILKIAQKKIECNHQINKFYCEVTNDVFIVN
NLETFTEMLSTLDSYLIDVYDHSYRTYNSYVCFVVILTNKGNVYIIDCIKLRQAIIDKGL
FTCNFKKVFTNIKNFTKLKVDFKNITCYSIADYYCDDNCILFKDFNITVNTYIDWRIENL
HIYLKNFLSTKIINFYKNIKTELIDNPCSYIENDEDFLYLEKDTELYFKTFKEFFVSKYL
LDDDKYLLKLIKVRETYARDNNESIYYVMTNGQLSIFAKLKLKNEKEIIKHKIILSSIVK
QNLDQFLYSCT
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgaaaaatcttgctaatctcgcaaagcaatttattacacaattaaataaaacaataaat
gtatctaatgcttcaaaacctgataaatgttattataaagaagtacttgacaatattcgt
aagcttaagccatattttgcatttgatgaagtttctattacaaattgtattgaatcgtca
aatattaaaattgacaaaaaaaatattttagcattaatttatgaaaatgaaataaaggct
ataattggaaaatattgtcaatcttataagatattaaaaatagctcaaaaaaaaatagaa
tgcaatcatcaaattaacaaattttattgtgaagttacaaatgacgtttttatagttaat
aacttagaaacttttacagagatgttatcgactttagattcttatttaatagatgtctat
gatcattcttatagaacatataattcttatgtatgtttcgttgttatactcactaataaa
ggaaatgtttatattatagattgcattaaattacgacaagcaatcattgataagggatta
tttacatgtaattttaagaaagtatttacaaatataaaaaattttacaaaattaaaagtc
gattttaaaaatatcacctgttatagtattgcagactattattgtgatgataattgtatt
ctttttaaagattttaatattactgtaaatacttacattgattggcgcatagaaaattta
catatttatttaaaaaattttttaagtacaaaaattataaatttttataaaaatataaaa
acagaattaattgataatccttgttcttatatagaaaatgatgaagattttttgtacctt
gaaaaagatacagagttatattttaaaacatttaaagaattttttgtatcaaaatattta
ctagatgatgataaatatttattaaaattaataaaagttagagagacatatgctagagac
aacaacgagtcaatatactatgtgatgacgaatggtcaactgtctatttttgctaaacta
aaattaaaaaatgaaaaagaaataataaagcacaaaattatactttcatcgatcgttaaa
caaaatttagatcaatttttatattcttgtacataa

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