Vairimorpha ceranae: NCER_101007
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Entry
NCER_101007 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nce
Vairimorpha ceranae
Pathway
nce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCER_101007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nce03019
]
NCER_101007
Messenger RNA biogenesis [BR:
nce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
NCER_101007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HRDC
Motif
Other DBs
NCBI-ProteinID:
EEQ82295
UniProt:
C4V8Z9
LinkDB
All DBs
AA seq
371 aa
AA seq
DB search
MKNLANLAKQFITQLNKTINVSNASKPDKCYYKEVLDNIRKLKPYFAFDEVSITNCIESS
NIKIDKKNILALIYENEIKAIIGKYCQSYKILKIAQKKIECNHQINKFYCEVTNDVFIVN
NLETFTEMLSTLDSYLIDVYDHSYRTYNSYVCFVVILTNKGNVYIIDCIKLRQAIIDKGL
FTCNFKKVFTNIKNFTKLKVDFKNITCYSIADYYCDDNCILFKDFNITVNTYIDWRIENL
HIYLKNFLSTKIINFYKNIKTELIDNPCSYIENDEDFLYLEKDTELYFKTFKEFFVSKYL
LDDDKYLLKLIKVRETYARDNNESIYYVMTNGQLSIFAKLKLKNEKEIIKHKIILSSIVK
QNLDQFLYSCT
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttgctaatctcgcaaagcaatttattacacaattaaataaaacaataaat
gtatctaatgcttcaaaacctgataaatgttattataaagaagtacttgacaatattcgt
aagcttaagccatattttgcatttgatgaagtttctattacaaattgtattgaatcgtca
aatattaaaattgacaaaaaaaatattttagcattaatttatgaaaatgaaataaaggct
ataattggaaaatattgtcaatcttataagatattaaaaatagctcaaaaaaaaatagaa
tgcaatcatcaaattaacaaattttattgtgaagttacaaatgacgtttttatagttaat
aacttagaaacttttacagagatgttatcgactttagattcttatttaatagatgtctat
gatcattcttatagaacatataattcttatgtatgtttcgttgttatactcactaataaa
ggaaatgtttatattatagattgcattaaattacgacaagcaatcattgataagggatta
tttacatgtaattttaagaaagtatttacaaatataaaaaattttacaaaattaaaagtc
gattttaaaaatatcacctgttatagtattgcagactattattgtgatgataattgtatt
ctttttaaagattttaatattactgtaaatacttacattgattggcgcatagaaaattta
catatttatttaaaaaattttttaagtacaaaaattataaatttttataaaaatataaaa
acagaattaattgataatccttgttcttatatagaaaatgatgaagattttttgtacctt
gaaaaagatacagagttatattttaaaacatttaaagaattttttgtatcaaaatattta
ctagatgatgataaatatttattaaaattaataaaagttagagagacatatgctagagac
aacaacgagtcaatatactatgtgatgacgaatggtcaactgtctatttttgctaaacta
aaattaaaaaatgaaaaagaaataataaagcacaaaattatactttcatcgatcgttaaa
caaaatttagatcaatttttatattcttgtacataa
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