Vairimorpha ceranae: NCER_101243
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Entry
NCER_101243 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
nce
Vairimorpha ceranae
Pathway
nce03020
RNA polymerase
nce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCER_101243
09124 Replication and repair
03420 Nucleotide excision repair
NCER_101243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_101243
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_101243
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NCER_101243
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCER_101243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Antimicrobial_3
Motif
Other DBs
NCBI-ProteinID:
EEQ82111
UniProt:
C4V9J5
LinkDB
All DBs
AA seq
233 aa
AA seq
DB search
MKILIEESTDNIIKFTLRDTYVSYANALRRILISEVPTVTIDLVEIEINNTSLPDEMISH
RLGLVPLYTKKDLVFRDDCACDDICDKCSVSLTLNVSNNTDMPMVVTCKDLKSQDDVVIR
SSPVICKLGTRQNLKVICKAFKGVGKIHSKWSPVSVVGFEYDSGNRSRSTTYWRETDVDN
ECKEEEANLIDEITEVKMCVEVVEGFGRPVDILRKGLEILKGKYETLRNELIN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacttatagaagagtctactgataacataataaaatttaccttacgtgataca
tatgtatcttatgccaacgctttgcgtaggattcttatttcagaagttcctactgttact
attgatcttgtagaaatagaaataaataacacttcattacccgatgaaatgataagccat
agactaggattagtaccattgtacactaaaaaggatcttgtttttagagatgactgtgct
tgtgatgatatatgtgataagtgtagtgtctccttgacacttaatgtttctaataatact
gatatgcctatggttgtaacatgtaaagatcttaaaagtcaggatgatgtggtaattaga
agttcgccagttatctgtaaattgggtacacggcaaaatctaaaagtaatttgtaaagcg
tttaagggtgtaggaaagattcacagtaagtggagtccagtatcagtagtcggctttgaa
tatgatagtggtaatagaagtaggagtactacatactggagagaaacagatgtagataat
gagtgtaaagaagaagaggcgaatcttatagatgaaattaccgaagttaaaatgtgcgta
gaagttgtcgaaggatttggtagaccagtagatattttaagaaaaggattagagattttg
aagggtaagtatgagacattaagaaatgaattgataaattaa
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