Vairimorpha ceranae: NCER_101325
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Entry
NCER_101325 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
nce
Vairimorpha ceranae
Pathway
nce03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NCER_101325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_101325
03019 Messenger RNA biogenesis [BR:
nce03019
]
NCER_101325
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NCER_101325
RNA polymerase I system
NCER_101325
Messenger RNA biogenesis [BR:
nce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NCER_101325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW5_SPT5
Spt5-NGN
KOW
KOW2_Spt5
KOW7_SPT5
KOW1_SPT5
Sporozoite_P67
KOW4_SPT5
GPKOW_C
DUF6849
Motif
Other DBs
NCBI-ProteinID:
EEQ82035
UniProt:
C4V9R4
LinkDB
All DBs
AA seq
566 aa
AA seq
DB search
MAKNKINQYLSLEASESESEEESEDLDVNIEREPVLNYTDIAKRIKDKYLALNEDIDVEE
EEVEEDFVEGSTQAQFLPKKSSPRLFLVRVKRGSEKEIALRILQNKSKICSIIAKDGLKG
YIYIEAYQKQQVLDSFEKIRGIFRNKLSIVPQNEMIEAISYKDDLSNVEFGRLKKGKYKG
DLVQIIGSNGDMVKVRVMPRINEIKKLFDPVEYKDEVIKEGDNIYIYKRDLYVNGYLEKE
ILRSSVDLDIEPNFNELEQFNIRKRFDAGDKVKVIKGELIGTKGVVKSVTGPMTIIVAEG
KNFEIFSNFLDKYYNIGEEVCFNSENGIITNIKNNKYFIAIKNFTEEVVADVNQIKKPIP
YSKEFVRKEKARPVIKRDNLINKQVQIRKGQYKGYIGIVKDIYMNKCRIQISSNLKYVSV
PREDLVEFIINNEIENVTKRTFSSIVTKTPAYEPDGPINLNIDKNRDRFEMVDDKYKNAL
VKYNDEIYTVEYLSGNNFVTDGGVFNKNAVKYITPSREDNVIIMQGEDLGKPAILLEIDE
LTKNCVVKILNGNIKNLPLGILTKKN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaattaatcagtatttaagtttagaagcatcagaatcagaaagtgaa
gaggagtcagaagatttggatgtaaatattgaacgagaaccagttttaaattatacggac
attgctaaaagaattaaagataaatatttagcattgaatgaagatattgacgtagaagaa
gaggaagtggaagaagattttgttgaaggtagcacacaggcacaatttcttcctaaaaaa
tcatctcctcgactttttcttgttcgtgttaaacgtggcagcgaaaaagaaattgcctta
agaattttacaaaataaatctaaaatttgttcgataattgcaaaggatggcttaaaaggt
tatatttacattgaagcatatcagaaacaacaagttttggattcatttgaaaaaataaga
ggtatttttagaaataagcttagtattgttccacaaaatgaaatgatagaagccatttcc
tataaggatgacttaagtaatgtagaatttggtagattaaaaaaagggaaatataaggga
gatcttgtacaaattataggaagtaatggagacatggtaaaggttagagtaatgcctaga
attaatgaaataaaaaaactatttgatccagttgaatataaagatgaggttataaaagaa
ggagataatatttatatttataaaagagatttatatgtaaatggatatttagaaaaagaa
attttaagatctagtgttgatttagacatagaaccgaattttaacgagttagaacagttt
aacattcgtaaaaggtttgatgcaggagacaaggtaaaagttattaaaggggaattaatt
ggcacaaaaggagtagttaaaagtgttacgggtccaatgacaattattgtagcagaaggg
aaaaattttgaaattttttcaaattttcttgataaatattacaacatcggcgaagaggtg
tgttttaattctgaaaatggaattattactaatataaaaaataataagtattttattgca
ataaaaaattttacagaagaggtcgttgctgatgttaatcaaataaaaaaaccaattcct
tattccaaagaatttgtccggaaagaaaaagccagacccgtaattaaaagagataattta
attaataagcaagttcaaattagaaaaggtcaatacaaaggatatattggtatagtgaaa
gatatctacatgaataaatgtagaatacaaatcagctctaatttaaaatatgtatcagtt
cccagagaagatctagttgaatttataattaataatgaaattgaaaatgttactaaaaga
acattttctagtattgttactaaaacacccgcttatgaaccagatggcccgataaatcta
aatatagataaaaatagagatagatttgagatggtagatgataaatataaaaatgcttta
gttaaatataatgatgaaatttatactgtagaatatctcagtggaaataattttgtgaca
gacggtggagtatttaataaaaatgccgtaaaatatattacccctagtagagaagataac
gttattattatgcaaggagaggacttgggtaagcctgcaatattattagaaattgatgaa
cttacaaaaaattgtgttgtaaaaattttaaatggaaatataaaaaatctaccactaggt
attttgaccaaaaaaaattaa
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