Vairimorpha ceranae: NCER_101358
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Entry
NCER_101358 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
nce
Vairimorpha ceranae
Pathway
nce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCER_101358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nce03019
]
NCER_101358
Messenger RNA biogenesis [BR:
nce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCER_101358
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCER_101358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
EEQ82007
UniProt:
C4V9U4
LinkDB
All DBs
AA seq
218 aa
AA seq
DB search
MNYKLPGEIICDADEFIKGHGTQIKDDCLASVYFGLPKVINKLVTVVPKMYNRYNAEVGD
VVIGRVTAIYNKKWKIEMNCKSETSLNLSSINLPGVAQRRKLECDEIMMRDFFDIDDLIV
AEVQKVNKSGSVSLHTRNEKYRKLEKGVLVKLTASNVPYVKTRFLRFSDFEIIIGCNGYI
WIAPLKNNLETYRNVFHVVNYLKKCISENTVPDFDKIF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaactataaattgccaggcgaaataatatgtgatgcagacgagtttattaaaggacat
ggaacacaaattaaggatgattgtttagcatctgtttattttggactgccaaaagttatt
aataaattagttactgttgtgccaaaaatgtataatcgatacaatgctgaggtaggtgat
gttgtaataggaagagttacagctatttataacaaaaaatggaaaatagaaatgaattgt
aaatctgagacatcgctaaatttgtcatcgataaatttacccggtgtcgcccagcgtcga
aaacttgaatgtgatgaaataatgatgcgagattttttcgatatagatgatttaattgta
gctgaagtgcaaaaagtaaataaaagtggatcagtttcactacatacacgcaatgaaaaa
tatagaaagctggaaaaaggcgttctggtaaaattgacagcttccaatgtaccttatgtc
aaaacaagatttctaagattttcagattttgaaataattattggatgtaacggatatata
tggatagctccgcttaaaaataatttagaaacatacagaaatgtttttcatgttgtaaat
tatttaaaaaaatgcatttcagaaaatactgttccagatttcgataaaattttttaa
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