Vairimorpha ceranae: NCER_101623
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Entry
NCER_101623 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
nce
Vairimorpha ceranae
Pathway
nce03020
RNA polymerase
nce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCER_101623
09124 Replication and repair
03420 Nucleotide excision repair
NCER_101623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_101623
03019 Messenger RNA biogenesis [BR:
nce03019
]
NCER_101623
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_101623
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
NCER_101623
Messenger RNA biogenesis [BR:
nce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCER_101623
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCER_101623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
EEQ81799
UniProt:
C4VAF6
LinkDB
All DBs
AA seq
155 aa
AA seq
DB search
MFFVKDFTHIIHLNPCYLGPKIQSLIKDYLYKTIEGSCNDSGYVISVLEIDDVSEGTVSL
NGATSFKIKYKALVLKPFKGETMEASVVEINKMGVFASVGPLTVFVSNHQIPSEIQEGGL
LKDSIVRLKIIGTKIDSSKIYAVGTLNDEYLGILS
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtgaaagatttcacacacatcatacacttgaatccttgttatctgggccca
aaaatacaatcattaataaaggattacttgtacaagacaatagaaggatcttgtaatgat
agtgggtatgtcatatcagtgctagaaatagatgatgttagtgagggaactgtaagctta
aacggggcaacaagctttaaaataaaatacaaggctctggttctaaaaccttttaaaggc
gagaccatggaagcttctgttgttgagataaataaaatgggagtttttgcgtcagtagga
cccctcactgtttttgtatctaatcatcaaattcccagtgaaatacaagaaggagggtta
cttaaagattcaatcgttagattgaagattattggcacaaaaatagactcatctaaaatt
tatgcagtaggtacattaaatgatgaatatttaggaattctttcatag
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