Vairimorpha ceranae: NCER_101643
Help
Entry
NCER_101643 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
nce
Vairimorpha ceranae
Pathway
nce03030
DNA replication
nce03410
Base excision repair
nce03420
Nucleotide excision repair
nce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCER_101643
03410 Base excision repair
NCER_101643
03420 Nucleotide excision repair
NCER_101643
03430 Mismatch repair
NCER_101643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nce03032
]
NCER_101643
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_101643
DNA replication proteins [BR:
nce03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCER_101643
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCER_101643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_lid_RFC1
RuvB_N
RNA_helicase
AAA_14
nSTAND3
AAA_6
DUF815
PH_NF1
NTPase_1
AAA_16
EAD11
AAA_19
AAA_5
AAA_33
Motif
Other DBs
NCBI-ProteinID:
EEQ81783
UniProt:
C4VAH1
LinkDB
All DBs
AA seq
598 aa
AA seq
DB search
MKDFFKNKTFVFTGELTLDREYAKSKVILLGGRVTIAPSKKTDFLVVGAEPGPVKLKKAQ
DLNIKIIYEQEFTTNLNECLQSDDISNVLNQNNGGMTTEADQISSDFDEASVFDTPEESI
QKSKDINAIIEPEKATTYTNMWSEKYRPKKRSDLIGNSSVIDSLADFMLGKTKNRGALLS
GSPGIGKTTSVHVLCKELGLDLVEFNASDVRNKSLLVKKVKGIINSQGISKGLKLKKKIV
LMDEVDGMTSDRGGLVELNNLIKESIIPIVCICNDRNNIKIRTLANNCLDLKFRKPDSRQ
IVPRIKVILKHENKVLGDNIINEVISLSHGDIRYILNNIQRICVNDKININLMSSLTKKT
ILKSVFEIASECFHGKSINEKTDLYFEDYSLIPLFIAENYMKLKFANLIDFYKSSESISS
GDVVEKLIRGSTQEWSLLPLHGFFTVVLPTKDKALFKGIDFPSWLGQNSRYLKHQRIIKE
VKRHVSKYVNSGLENFRLYDSYIIFLEILNFLKENNVKSAIDLLKEYDLIKDDFVNLSEL
LLDGQALYKEVKTKTKGDFTRQYNKIKRHLPYEIGEIKKAKGSNNEELEEEDENNFYY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttttttaaaaacaaaacattcgtatttacaggagaacttacattggatagg
gaatatgcaaagtcaaaagtaattctcctgggcggcagagtcacaatagcaccatcaaaa
aagacagattttttagtggtaggtgcagaaccaggaccagtaaaattaaaaaaagcacag
gatttaaatattaagattatttatgagcaagaatttacgacaaatcttaatgaatgttta
caaagtgatgatatttctaatgttttaaatcagaataatggcggaatgacaacagaagca
gatcaaatcagttctgattttgatgaggcatctgtttttgatacacctgaagaatcgata
caaaaatctaaagatattaatgcaataattgagcctgaaaaggcaacaacttacacaaat
atgtggtctgaaaaatatcggcctaagaaacggtctgatctgataggcaatagttctgta
atagactcgcttgcagattttatgcttggaaaaactaagaatagaggtgcattgctaagt
ggatcgccgggtataggaaaaacaacttctgtacatgttttatgtaaggaattgggattg
gatctagtagagtttaatgcaagtgatgtgcgtaataaatctttgttggttaaaaaagtt
aaaggaataataaactcgcagggaatttctaaaggacttaaattaaaaaaaaagattgtt
ttgatggatgaggtagatggaatgacaagtgatagaggtgggctagtagaacttaataat
cttattaaagaaagtattataccaattgtatgtatttgcaatgacagaaataatataaaa
attagaacattggctaataattgtttagatcttaaatttagaaaacctgatagtagacag
attgtacctcgaattaaagtaatacttaaacatgaaaataaagtactaggagataatatt
attaacgaagttatttctctaagtcatggtgatattcgttatattctaaataatattcaa
cgaatatgcgttaacgataaaattaatattaatttaatgtcaagtctcacaaagaagact
atcttaaaaagcgtatttgaaatagcatcagaatgttttcatggtaagtcaataaacgaa
aaaacagatttatattttgaagattattcattaataccgctttttatagcagaaaattat
atgaaacttaaatttgcaaatcttattgatttttataaatcatcagaatccatttctagc
ggagatgtagtcgaaaaattaataagaggaagtacacaagaatggagtcttttgcctctt
catggcttttttaccgtagttttacccacaaaagataaagctttgtttaaaggaattgat
tttcccagttggttagggcaaaattcaagatatttaaaacatcaaagaataattaaagaa
gttaaaaggcatgtgtcaaaatatgtaaattctggtttagaaaattttagactttacgat
tcttatattatttttttggagatccttaattttttaaaagaaaacaatgttaaatctgct
atagatttattaaaagaatatgatctaataaaagatgattttgtcaatttgtctgaatta
cttttagatggacaagcattgtataaagaggtaaagacaaaaactaaaggagattttaca
agacaatacaataaaattaaaagacatcttccttatgagattggagagattaaaaaagca
aaaggttctaataatgaggaactagaagaagaggacgaaaataatttttattattaa
DBGET
integrated database retrieval system
