Nostoc cf. commune: ANSO36C_12190
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Entry
ANSO36C_12190 CDS
T10378
Name
(GenBank) ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ncf Nostoc cf. commune
Brite
KEGG Orthology (KO) [BR:
ncf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncf03016
]
ANSO36C_12190
Enzymes [BR:
ncf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ANSO36C_12190
Transfer RNA biogenesis [BR:
ncf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ANSO36C_12190
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
KhtT_N
Motif
Other DBs
NCBI-ProteinID:
BDI15417
UniProt:
A0ABM7YXN4
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All DBs
Position
complement(1373093..1375153)
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AA seq
686 aa
AA seq
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MEKGTLVEFRVQGDRRLGIVERPDGKTRWFVVDERGQSHSLAPKQITYTVTGQSYKNSEI
ASFLEQIKPYLDPSSLEVAWELLVEDGETVTPDLMANLLFSESTAPPCYAAYCLLSDDKL
YFKQKGDAYEPRTAAQVAERKHQLEVEALKAKGQQEFLTRVEQALKGEAVEWGRHDRQRL
EGLEKYAALLADTVRTGVNYDSLARAYPPSAPVLETMTMLGRPTTPQGAFQLLVDLGYWS
PYENLFLRRSSIPIQFPHKVLEVSQQRLDFPPIDSDTNRLDLTHLKVYTIDDETTTEIDD
GLSWEVLPDGRERVWAHIADPTRWLVPEDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLIQGKVCCALSFGVILGTSGVVEDYSIHTSLIKPTYRLTYEDVDEMLQLRVQAEPEIA
AIASWSQRRKAWRYAQGAISITMPEAMIKVKGDEINIDILDDSPSRQVVAEMMILAGEVA
ARYGKVHNIPLPFRGQPQPELPPEEELLQLPAGFVRACAMRRCMPKSEMSITPLRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSAEQLKEVMMNVTSITQELTMVERQT
NRYYALEYLRRHPEEIWDVTVLMWLREDSNLALILLEDLGLQLPMVFKRSVNLGEQIVVK
VSHADPQKDMIQFQEIIYQEAQTAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgtctgggcatcgta
gaacgtccagacggtaaaacccgctggtttgtggtagacgaacgtggtcaatcccacagc
ctcgcgcctaaacaaataacttatacagttactggacagagttataagaactccgaaatt
gccagctttttggagcagataaagccttatttagacccatctagcttggaagtagcttgg
gaattactggttgaagatggggaaacagttaccccagaccttatggcaaatctgctattt
tcggagtcaaccgcgcctccttgttatgccgcctattgcttgttatcagacgataaactc
tatttcaagcaaaaaggagacgcttacgagccgagaactgctgctcaagtggcagaacgc
aagcaccaactagaagtagaggcactaaaagctaagggacagcaggaatttttaactcgt
gtagagcaggcactcaaaggtgaagcagtagagtgggggcgtcacgatcgccaacgccta
gaaggactggaaaaatatgcagcgctgcttgctgataccgtgcggacaggagttaattat
gactctttggctcgcgcttatccgccaagcgctcccgtattagaaacaatgaccatgctg
gggcggcctacaacaccccaaggagcctttcaactgttggtggatttgggttactggagt
ccttatgaaaacctgttcctacggcgttcttcaattccgattcaatttcctcataaggta
ttagaagtgtcgcaacagcgtttggatttcccgccgattgactcagatacaaaccgcctg
gatctgactcacctgaaggtttacaccattgatgatgaaactaccacagaaatcgacgat
ggtctgagttgggaagtacttcccgatgggcgggaacgagtgtgggcgcatatcgccgat
cccactcgatggttagtgccagaagatgaattagatttggaagccagaaagcgaggtagt
acagtctatttacctacagggatgattcccatgtttccagaagtattggcaactgggcca
atgagtctgatacagggaaaagtttgttgcgccctcagtttcggggttattttaggtaca
agtggagtagtagaagattacagtattcataccagcttgattaagccgacttatcgcctc
acctacgaagatgtagatgagatgttgcaattacgggtacaagcagaaccagaaattgcc
gcgatcgccagttggtcacaacggcggaaagcttggcgttacgctcaaggggcaattagc
atcactatgccggaagcgatgatcaaagtcaaaggtgatgagatcaacattgacattttg
gacgattccccatcgcggcaagtggtggcagaaatgatgattcttgccggtgaagttgcg
gctcgttatggtaaagttcataacatacctttgccatttcgcggtcagccacaaccggaa
ttacccccagaagaggaattacttcaacttccggctggatttgttcgcgcctgcgctatg
cgtcgttgtatgcccaaaagtgagatgagcattacgcctttgcgtcatgctggtttgggt
ttggatacttacactcaagcaacctctcccatccgccgctacagtgacttgcttacccac
tttcaacttaaagctcatttgcggggtgaagttctgccattttccgcagaacaacttaaa
gaagtgatgatgaatgtcactagcatcacccaagagttgacgatggtggaacggcaaact
aatagatattacgctctagagtatttacgccgtcatccagaggaaatctgggatgtgaca
gtgttgatgtggctgcgggaagacagcaacttggcgctaattttgttagaagatttaggt
ttgcaattaccaatggttttcaaacgttccgtgaacctgggcgaacagatagtagtgaaa
gttagccacgccgatccacaaaaagatatgattcagtttcaagaaataatttatcaagaa
gcacaaacagccgcgaattaa
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