Nostoc cf. commune: ANSO36C_20000
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Entry
ANSO36C_20000 CDS
T10378
Symbol
sigB_2
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ncf Nostoc cf. commune
Brite
KEGG Orthology (KO) [BR:
ncf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncf03021
]
ANSO36C_20000 (sigB_2)
Transcription machinery [BR:
ncf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ANSO36C_20000 (sigB_2)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
CTD3
Phage_GPO
IL1_propep
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BDI16198
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Position
2265458..2266477
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AA seq
339 aa
AA seq
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MSSLTSPPTEVQKTKKKSLAADKKPRATDDIVRSYLQEIGRVDLLTREQEVIFAQQVQQM
MNLLATKEELAVKLNHEPTQQEWADQVESSVQELKQQLSQGHQAKQKMIQANLRLVVAVA
KKYQHRNLEFMDLIQEGTLGLERGVDKFDPALGYKFSTYAYWWIRQGITRAIAQQGRTIR
LPIHVFEKLNKIKRVQRELSQQLGRVPTTAEIASALSLTPSQVRECLYLARQPFSLEARV
GEQQDTELQDILEDDGPSPEDYAVEESLHQDLQDLLAKLSPQQREILTLRFGLTDGYELS
LAQIGDRMGISRERVRQIEQKALSLLRRQKEQVRSYLAS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttaacatctccacctaccgaagttcaaaaaacgaagaaaaaaagtttagcg
gcagataaaaagcctcgagcaacagatgatattgtgcgtagttatctgcaagagatcggg
cgtgtagatttgttgactcgtgaacaagaggttatttttgctcaacaggtgcagcagatg
atgaatttgctagctactaaagaagaattggctgtgaaattaaatcacgaacccacgcag
caagaatgggcagatcaggtggagtcaagtgttcaggagcttaagcaacagctaagtcaa
gggcatcaagccaagcaaaaaatgatccaggctaatctccggttagtggtagcagtggcg
aagaaataccagcaccgcaacttggaatttatggatttaattcaagaaggtactttgggt
ttagagcgaggagtggataaatttgatcctgctcttggttataagttttctacttacgct
tactggtggattcgtcaaggaattacacgagcgatcgctcaacaaggacggacaattcgt
ttaccgattcacgtctttgagaaactgaacaaaattaaacgggtgcaacgagaattatct
caacagttaggtcgcgttcccactactgctgaaattgccagcgccttatctttgacaccc
agccaagttagagaatgtttgtacttagcccgtcaacccttctctttagaggcgcgagtt
ggtgaacagcaagatacagaattgcaagacatactggaggatgatggcccgtctcccgaa
gattacgctgttgaagaatctctccaccaagacttacaagacttgttggcaaagctttct
ccccaacaacgagaaatattaaccttacgttttgggctgactgatggctatgaactttct
ttagcacagattggcgatcgcatgggtattagtcgagaacgagtgcgtcagatcgagcaa
aaagctctcagtctcctccgacgccaaaaggaacaagtacgcagttatctggctagctaa
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