Nostoc cf. commune: ANSO36C_38020
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Entry
ANSO36C_38020 CDS
T10378
Name
(GenBank) RNA-binding protein
KO
K06959
protein Tex
Organism
ncf Nostoc cf. commune
Brite
KEGG Orthology (KO) [BR:
ncf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
ANSO36C_38020
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
HHH_9
S1
YqgF
HHH_7
S1_RRP5
baeRF_family10
HHH_6
SpoVAE
OB_RRP5_4th
DUF7645
Motif
Other DBs
NCBI-ProteinID:
BDI18000
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Position
4156186..4158345
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AA seq
719 aa
AA seq
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MLNIPQLLATEINLKPHQVQNALELLAEGATIPFIARYRKERTDEMNEVQLRELADRYTY
LTELEERKSVILSAIAQQGKLTDELKAKISSCLQKTELEDLYLPYRPKRRTRATIAREKG
LELLAEFIKSLNVKNAATASLEEEAAKYISEAKGVKTAEEALKGAADILAEEVAEKAELR
AYIRDYLLEEGVFVSRIKDDYPEGTTKFEMYRNYQIKVKNIAPHNMLALCRGETEKVLSF
EIAFDEDTVLYYLESKEIKTKVRTIRDFYQAMLKDAFNRLMKVSLMGEVISEIKVYADTE
SIKTFETNLRELLLSAPAGMKPTLAIDPGFRTGCKVAVLDQTGKFLEYQAVFPHQAAEQR
AKAAQIVKNLIEKYKIELIAIGNGTASRETEEFVTQVLETIERKPVKVMVNESGASIYSA
STVALEEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNMASKELLTSVSGITATVANNIVAHRNQNGAFKNRRQLLKVPKLGPK
AFEQAAGFLRIRGGDNPLDNTAVHPESYSVVEAIASDLNVPLNQVTQIAEKLKKTNLKKY
VTDSVGEPTLRDILSELEKPGRDPRAEFKYATFREGIKEIRDLKVGMELEGMITNVANFG
AFVDIGVHQDGLVHISQLADRFVDDPNKVVKVGQVVKVQVLEINEKLKRISLSMKAVKQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattcctcaactactggcaactgaaatcaacctcaaaccccatcaggtgcaa
aacgcgctggaacttttggcggagggtgcaacaattccttttattgcacgttaccgcaaa
gagcgcaccgatgagatgaatgaagtgcaactacgtgaactggctgatcgatatacttat
ttaacagaactggaagaacgaaaatctgtaattttaagtgcgatcgctcaacaaggtaaa
cttacagatgaactcaaagccaaaatctcatcctgcttacaaaaaaccgaacttgaggat
ttatacttaccctatcgaccaaaacgacgcactcgcgccaccatcgccagagaaaaagga
ctcgaactactggcagagttcatcaagtcgctaaatgtaaaaaatgctgcaacggcttct
ctggaagaagaagcggctaagtatatttctgaagctaagggagtaaaaacagcagaagaa
gcacttaaaggtgctgctgatattttagccgaagaagtggctgaaaaagctgaattacgg
gcatatatccgcgattatcttctagaagaaggggtatttgtctcccgtatcaaagatgat
tatcctgaagggacaaccaaatttgagatgtaccgtaactatcaaattaaggtaaaaaat
attgcaccccacaatatgctggcgttgtgtcggggtgaaacggagaaagtattaagcttt
gaaattgcttttgatgaagatacggtactttactatctggagtcgaaagaaattaaaacc
aaagttcggacaattcgggatttttatcaggcgatgttgaaggatgcattcaaccgtttg
atgaaagtctctctaatgggagaggtaatttctgagattaaagtctacgcagacacagaa
tctatcaagacatttgaaactaatctgcgagagttgctgctatctgcaccagcaggaatg
aaaccaaccttggcgatagaccctggatttagaactgggtgtaaagttgctgttctcgac
caaacggggaaatttttggaataccaagcggtttttcctcaccaagctgctgaacaacgc
gccaaagctgcacaaattgtcaaaaatctgattgaaaagtataagattgagttaatcgcc
attggtaacggtacagcctcccgcgagacagaagagtttgtcacgcaagtattggaaacc
atagaacgcaaaccagtgaaggtgatggtgaatgagtctggtgcatctatatattctgcc
agtactgtagcgttagaagagtttcccgatttagatattaccgtgcgcggtgcaattagc
atcggccgccgtttgcaagatcctctggcggaactggtgaaaatcgatcccaaatctatt
ggtgtgggacaatatcagcacgatgtcgatcagaagttgttgaaaaagaaattggatgag
actgtagaaagctgcgttaactacgtcggcgtagacttgaacatggcctccaaagaactt
cttacttctgtctctgggattacggcaacagttgccaataatattgtcgcccatcgcaat
cagaatggagcctttaaaaatcgccgccaacttttgaaagttccgaaattggggccgaag
gcttttgaacaagcggcgggttttctgcggattcgcggcggtgacaacccattagataat
acagcagtgcatccagagagttattctgtagtagaagcgatcgcatctgatctaaatgtg
ccattaaatcaggtgacacaaattgccgaaaaacttaaaaagactaatctgaagaaatac
gttaccgatagcgtcggcgaacccacactgcgcgacattctcagcgaactagaaaaacca
ggtagagatccccgtgcagaatttaagtatgccaccttcagagaaggaattaaggaaatc
agggacttgaaagtgggaatggaactagagggaatgatcacaaatgttgccaacttcggc
gcgtttgtcgatatcggcgtacatcaagatggcttggtgcatatatcccaacttgctgat
agatttgtagacgatcccaacaaagttgtcaaagttggacaagtagtcaaagtgcaggtg
ctagaaatcaacgagaaactgaagcggattagtttatcgatgaaagcagttaaacaataa
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