Nostoc cf. commune: ANSO36C_44020
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Entry
ANSO36C_44020 CDS
T10378
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ncf Nostoc cf. commune
Brite
KEGG Orthology (KO) [BR:
ncf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncf03032
]
ANSO36C_44020 (topA)
03400 DNA repair and recombination proteins [BR:
ncf03400
]
ANSO36C_44020 (topA)
Enzymes [BR:
ncf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ANSO36C_44020 (topA)
DNA replication proteins [BR:
ncf03032
]
Prokaryotic type
DNA Topoisomerases
ANSO36C_44020 (topA)
DNA repair and recombination proteins [BR:
ncf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ANSO36C_44020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF6429
Motif
Other DBs
NCBI-ProteinID:
BDI18600
LinkDB
All DBs
Position
complement(4795035..4797686)
Genome browser
AA seq
883 aa
AA seq
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MSTLVIVESPTKARTIRNYLPAGYRVEASMGHVRDLPQSASEIPAAVKGETWAQLGVNVD
ADFEPVYVVPKDKKKIVTQLKEALKDVDELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQEAIKKALKDCRQIDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRVLVTRERQRRAFHEGTYWDLKASLSKEKTPFASQLVTLAGTKIANGSDFDATTGQ
ITAGRNVLLLNEDQAVALKERLTGKTWSVSDMEERPVTRKPAPPFTTSTLQQESNRKLRL
SARDTMRVAQNLYEQGYITYMRTDSVHLSDQAIAAARSCVEKLYGQQYLSPQPRQYTTKS
KGAQEAHEAIRPAGSSFRTPQETALGGRELAVYDLIWKRTVACQMADSRQTQITVQLQVE
DAGFRSSGKRIEFPGYLRAYVEGSDDPEAALEDQEVILPNLKVGDHPNCTELEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIIDKGYAHLVSNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDDIATGEAKWLPYLQQFYLGEKGLETLVRERESQIDATKART
VELENLDAKVRIGKYGPYIEVVNGEGVITASIPKDLTPADLDPKQVEVLLRQKITGPDQV
GRHPETGEPIYVKIGAYGPYVQLGDKTDENPKPKQASLLKGVTPETVTLEMAVGLLALPR
TLGVHPVTGGKIQASLGRFGPYVVHDQGKEGKDYRSLKAADNVLTITPERALELLAEPKK
GRSSTNSKSKAALRELGTHPEDGEAINIYDGPYGPYIKHGKTNVSIPEGQTVENITLAEA
LNLLAAKASTGKSTRKTSKSTSSKSKSTAKSSTTAAKKKATET
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcatcgtcgaatctccaaccaaagctcgtaccattcgcaactacctg
ccagcaggctatcgggtggaagcgtctatgggtcatgtgcgtgacttaccccagtcggct
agtgaaattcctgctgccgtcaagggggaaacatgggcgcagctaggggtaaatgtggac
gccgactttgaaccggtatatgttgtcccgaaagacaaaaagaaaattgtcacccagctt
aaagaagccctaaaagatgtagatgaactgattctggcaacggacgaagaccgggaaggt
gaaagcattagttggcatttataccaactgctgaagccgaaagttccgactaagcggatg
gtgtttcacgaaattacccaagaggcgatcaaaaaagctctgaaagactgccgtcaaatt
gatgagcagttggttcgcgcccaagaaacccggcggattttagatcgattggtaggctat
accctgtctcccttgctatggaaaaaaatcgcctggggattatctgctgggcgagtgcaa
tctgtagctgtgcgagttttagtgactagggaacgccaacgccgcgctttccatgagggt
acatactgggatttgaaagctagtttgtcaaaggaaaaaaccccctttgcttcccagttg
gtaacattggcaggaaccaaaatcgctaacggtagcgattttgacgcaaccaccggacaa
attaccgcaggtcgcaatgtcttgttgctcaatgaagaccaagctgtagcgctcaaggaa
cgcctaactggtaaaacctggagtgttagcgacatggaggaacgcccagtaacgcgcaaa
cctgcgccaccgttcaccacctcaacactgcaacaagaatctaaccgaaaattgcgcctc
tcagcccgtgacacaatgcgggttgcccagaatttgtacgagcaagggtatattacctat
atgcggacagattctgtacatttgtcagatcaagcgatcgcagctgctcgaagttgtgta
gaaaagctttacggtcaacaatacctcagtccccaaccccggcaatacaccaccaaatct
aaaggcgcacaagaagcgcacgaagcaattcgtccagcaggtagcagcttccgcacgccc
caagaaactgctttgggtggtcgagaacttgccgtttacgatttgatttggaagcggact
gtcgcctgtcaaatggctgattctcgccaaactcaaattaccgtgcagttgcaagttgag
gatgctggattccgttcttctggcaaaaggattgaatttccaggatacttacgcgcctac
gtcgaaggttcagacgacccggaagcagcactggaagatcaggaagtaattttgccgaat
ctgaaagtgggagatcatccgaattgtacagagttagaagccgttgggcacgaaactcaa
ccgccagctagatacaccgaagcaactttggtgaaaaccttagaaagcgaaggtatcggt
cgtcccagtacctacgccagcatcattggcacaattatcgacaagggttacgcccatttg
gtaagtaacgctctcattcccactttcactgctttcgccgtcaccgacttgctggaaaaa
catttcccagacatcgttgatcctagtttcacctcgaaaatggagcaaacccttgatgac
attgctacgggtgaagcgaaatggttgccctacttgcagcaattttatttaggagaaaaa
gggctggaaaccttagttagagaaagggaaagtcaaattgatgccaccaaagctaggact
gtagaactagagaatctagatgccaaagtccgcattggaaaatatggcccctacattgag
gttgtgaatggtgagggggtgatcaccgcctcaattcccaaagacttgacaccagctgac
ctcgaccccaaacaggtagaagtgctgctgcggcaaaaaatcactggccctgaccaggta
ggtcggcatcccgaaactggcgaaccgatttatgtgaaaattggtgcttacgggccttat
gttcaattgggtgataaaaccgacgaaaaccccaaaccgaaacaagcctccctactcaaa
ggtgtcaccccagaaaccgttaccctggaaatggctgttggtctgttggcgctaccccga
acattgggagttcacccagttactggcggcaaaatccaagcaagtttaggacgctttggg
ccttatgtggttcatgaccagggtaaggagggaaaagattaccgctccctaaaagctgct
gacaatgtattgacaattaccccagaacgtgcgttggaattgttggctgaaccaaaaaag
ggacgcagttccaccaacagtaagtctaaggcagctttgcgcgaattgggtacgcatcca
gaggacggggaagcaattaacatctacgatggcccttatggcccttacattaagcatggc
aaaactaatgtaagtatcccagaaggtcaaacggtggaaaatataacgctggctgaggcg
ctgaacttgttggcagctaaggcatcaaccgggaaatcgactcgcaaaacgagtaaatca
acgagttccaaatctaagtcaactgctaaatcatcaacgactgctgcgaaaaaaaaagct
acagaaacctag
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