Nocardiopsis changdeensis: KGD84_03705
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Entry
KGD84_03705 CDS
T08932
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncg03016
]
KGD84_03705 (thpR)
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KGD84_03705 (thpR)
Transfer RNA biogenesis [BR:
ncg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KGD84_03705 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QUX23495
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All DBs
Position
767076..767669
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AA seq
197 aa
AA seq
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MRLFVALTPPAAVVDAVLGAREPGLRHTPDLHWTRPDGWHLTLAFLGEVPDDLLPGLTGA
LGAAVGEHDPFDLTVDGWGVFPHPHRDRAAVLWAGVGGDTGALAALSADLRAAASAAGLP
GEDRIYVPHLTVARSRPPRDLTGLLSELGNGPQAPWPARDVHLVESRPGREDRYRTARTW
ALGWKTDPGRPPERSTA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcgtcgcactgacaccgcccgccgcggtcgtcgacgccgtcctcggcgcc
cgcgaaccgggcctgcgccacacccccgacctgcactggacccggccggacgggtggcac
ctcaccctcgccttcctcggcgaggtccccgacgacctgctgccaggcctcaccggagca
ctgggcgcggcggtcggtgaacacgaccccttcgacctcaccgtcgacggctggggcgtc
ttcccccacccccaccgcgaccgggccgccgtcctgtgggccggggtcggcggcgacacc
ggcgccctcgccgccctgagcgccgacctgcgcgccgcggcgtccgccgccggccttccc
ggcgaggaccgcatctacgtgccgcatctcaccgtcgcccgcagccgcccgccccgggac
ctcaccggcctgctctccgagctggggaacggcccgcaagcgccctggcccgcccgcgac
gtgcacctcgtcgagagcaggcccggacgggaggaccgctaccgaaccgcccggacctgg
gcgttaggctggaaaaccgacccgggacgaccgccagagcggagcacggcatga
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