Nocardiopsis changdeensis: KGD84_04345
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Entry
KGD84_04345 CDS
T08932
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg02010
ABC transporters
ncg02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KGD84_04345
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
KGD84_04345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncg02000
]
KGD84_04345
Transporters [BR:
ncg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
KGD84_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QUX23599
LinkDB
All DBs
Position
complement(908247..909452)
Genome browser
AA seq
401 aa
AA seq
DB search
MRISRMLLAGTAGLTLMLSACTTDAPDEAAPGGEGGAGMTPDAEWFDEAEYEAQLAQREI
TPEGSPDEPWLQAIEPEWTDTSEFVHDSPEDATVCFSNASVSNPWRVTGFITMEQQVEAL
QEEGRIGEFRVSDAADDDNQQISDIQAFVDSGDCDAIIISPSTTATLTPAVETACESGVP
VIVFDRGVNTDCMVTFIHPIGGYAYGADAAEFLVENLEPGSRVLALRILPGVDVLEHRWA
AAQQIFGESELEVLGFEFTEGDGAKIKDLVSQHLQRGEVDGIWMDAGDGAVAALEAFEDA
GQPYPVISGEDELSFMRKWDEEGLTAIAPVYSNFQWRTPVLAAAMILGGEEVPSEWILPQ
EPIRQGELQDYLDRNADMPSLHYAKFGGEDLPGFPEAWTDR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatctcacgcatgctgctcgccggcaccgccggcctgacactgatgctctcggcg
tgtaccaccgacgcgcccgacgaggccgcgccgggaggtgagggcggcgccgggatgacg
ccggacgccgagtggttcgacgaggccgagtacgaggcccagctcgcccagcgggagatc
acgccggagggctcgcccgacgagccctggctccaggcgatcgagccggagtggacggac
acctcggagttcgtccacgactcccccgaggacgccaccgtctgcttctccaacgcctcg
gtctccaacccctggcgcgtcaccggcttcatcaccatggagcagcaggtggaggcgctc
caggaggagggccggatcggcgagttccgggtgtcggacgccgccgacgacgacaaccag
cagatctccgacatccaggccttcgtggactcgggcgactgcgacgccatcatcatctcg
ccgtccaccacggccacgctgactccggcggtggagaccgcgtgcgagagcggcgtcccg
gtcatcgtgttcgaccgcggcgtcaacaccgactgcatggtgaccttcatccacccgatc
ggcggctacgcctacggcgccgacgccgccgagttcctggtggagaacctggagccgggc
tcccgagtgctggcactgcgcatcctgccgggtgtggacgtgctggagcaccgctgggcg
gccgcccagcagatcttcggcgagagcgagctggaggtgctcggcttcgagttcaccgag
ggcgacggcgccaagatcaaggacctggtctcccagcacctgcagcgcggcgaggtcgac
ggcatctggatggacgccggcgacggcgccgtggccgccctggaggcgttcgaggacgcc
ggccagccctacccggtgatctccggtgaggacgagctgagcttcatgcgcaagtgggac
gaggaggggctgaccgcgatcgcgccggtgtactccaacttccagtggcgcaccccggtg
ctggccgccgccatgatcctgggcggcgaggaggtgccctccgagtggatcctgccgcag
gagcccatccgccagggcgagctccaggactacctggaccgcaacgccgacatgccgtcg
ctgcactacgccaagttcggcggggaggacctgcccgggttccccgaggcctggaccgac
cggtag
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