Nocardiopsis changdeensis: KGD84_05265
Help
Entry
KGD84_05265 CDS
T08932
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KGD84_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_05265
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KGD84_05265
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KGD84_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
HHH
AAA_22
PIF1
DAP3
UvrD_C
AAA_16
PhoH
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QUX23754
LinkDB
All DBs
Position
1115291..1117531
Genome browser
AA seq
746 aa
AA seq
DB search
MPEEKRAPAVVQGVLERITYANEETGYTVARVDTGRGSADLLTVVGALMGVQPGEALRMH
GRWGSHPQYGRQFHVDDYTTVLPATVQGIRRYLGSGLIKGIGPKMAERIVGHFGTDALDV
IEQEPGRLIEVPGLGPKRTRLIAEAWEEQKAIKEVMVFLQGVQVSTSLAVRIFKKYGEAS
IEVVQKEPYRLATDVWGIGFKTADTIAQAVGIPHDSPQRVMAGIQFTLSESTGDGHCHLP
EEKLISAAVKILGVDSGLVIECLSRLVEEEGVVREEVPGPDGEPVRAIHLVPFHRAEVGA
AAGLLTLLNHPHDRMPAFVDVDWDVALDWLHRRTGTELAEEQRAAVIQALTRKVGVLTGG
PGCGKSFTVASIVTLAAVKGAKVVLAAPTGRAAKRLTELTGHEAATVHRLLELRPGGDAS
YDRDNPLDCDLLVVDEASMLDLILANKLIKAVPPGAHLVLVGDVDQLPSVGAGQVLRDLL
AEDSPLPSVRLTRVFRQAQQSGVVTNAHRINRGEPLLFEGMRDFFLFPCEESEDAAAMAV
DVVARRIPRTFGLDPRRDVQVLTPMKGGPAGAGNLNTALQEALTPAGEGVPERRFGGRIF
RVGDKVTQIRNNYDKGANGVFNGTLGVVTGLDPVAQELTVRTDEDEEIAYDFAELDELAH
AYAITVHRSQGSEYPAVVIPVTTSSWMMLQRNLLYTAVTRAKRLVVLVGSRRALAQAVRN
ASSGRRHTALAHRLRGYAQGSWTETP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaggagaagcgcgcccccgccgtcgtccagggcgtcctggagcgcatcacctac
gccaacgaggagaccggctacaccgtcgcccgcgtcgacaccgggcgcggctccgccgac
ctgctcaccgtggtcggcgccctcatgggcgtgcagccgggcgaggccctgcgcatgcac
ggccggtggggctcccacccccagtacggccgccagttccacgtggacgactacaccacc
gtgctccccgccaccgtccagggcatccgccgctacctgggctcgggcctgatcaagggc
atcggccccaagatggccgagcgcatcgtcgggcacttcgggaccgacgccctcgacgtc
atcgagcaggagcccgggcgcctgatcgaggtgcccggactgggcccgaagcggacgagg
ctcatcgccgaggcgtgggaggagcagaaggccatcaaggaggtcatggtcttcctccag
ggcgtccaggtcagcacctcgctcgcggtgcgcatcttcaagaagtacggcgaggcctcc
atcgaggtcgtccagaaggagccctaccgcctggcgaccgacgtgtggggcatcggcttc
aagaccgccgacaccatcgcgcaggccgtcggcatcccccacgacagcccccagcgcgtc
atggcgggcatccagttcaccctctcggagtccaccggcgacgggcactgccacctgccg
gaggagaagctcatctccgccgccgtcaagatcctgggcgtcgactccggcctggtcatc
gagtgcctgtcccggctggtggaggaggagggcgtggtccgggaggaggtccccggcccc
gacggcgagccggtgcgggcgatccacctggtgcccttccaccgcgccgaggtcggcgcc
gccgccgggctgctcaccctgctgaaccacccgcacgaccgcatgcccgccttcgtggac
gtggactgggacgtcgccctggactggctgcacaggcgcaccggcaccgaactcgccgag
gagcagcgcgccgccgtgatccaggcgctcacccgcaaggtcggcgtcctcaccggcggt
cccggctgcggcaagtccttcacggtcgcctccatcgtcaccctcgccgccgtcaagggc
gccaaggtggtgctggccgcccccacgggccgggccgccaagcgcctcaccgagctgacc
gggcacgaggccgccaccgtccaccgactgctggagctgcgcccgggcggcgacgcctcc
tacgaccgcgacaaccccctggactgcgacctgctcgtggtggacgaggcgtcgatgctg
gacctcatcctcgccaacaagctcatcaaggccgtcccgcccggcgcccacctggtgctg
gtgggcgacgtcgaccagctgccgtcggtgggcgccgggcaggtgctgcgcgacctgctc
gccgaggactcgccccttcccagcgtccgcctcacccgggtgttccggcaggcgcagcag
tccggggtggtcaccaacgcccaccggatcaaccgcggggagcccctgctcttcgagggc
atgcgcgacttcttcctcttcccctgcgaggagtccgaggacgccgcggccatggccgtc
gacgtggtcgcccgccgcataccgcgcaccttcggcctggacccgcgccgcgacgtgcag
gtcctcacccccatgaagggcgggcccgccggggccggcaacctcaacaccgcgctccag
gaggccctcaccccggcgggggagggggtgcccgagcgccgcttcggcggccgcatcttc
cgggtcggcgacaaggtcacccagatccgcaacaactacgacaagggggccaacggcgtc
ttcaacggcaccctcggcgtcgtcaccggcctggacccggtcgcccaggagctgaccgtg
cgcaccgacgaggacgaggagatcgcctacgacttcgccgagctcgacgagctcgcccac
gcctacgccatcaccgtgcaccggtcccagggcagcgagtacccggcggtggtgatcccg
gtcaccaccagctcgtggatgatgctccagcgcaacctgctctacaccgccgtcacgcgc
gccaaacgcctggtcgtgctggtcgggtcgcgccgcgccctggcccaggcggtccgcaac
gcctcctccgggcgccgccacaccgcgctggcgcaccggctgcgcggatacgctcaggga
tcgtggaccgagacaccctga
DBGET
integrated database retrieval system
