Nocardiopsis changdeensis: KGD84_05350
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Entry
KGD84_05350 CDS
T08932
Name
(GenBank) ATP-dependent helicase
Organism
ncg
Nocardiopsis changdeensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
AAA_12
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUX23770
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All DBs
Position
1132854..1135994
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AA seq
1046 aa
AA seq
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MRRPHRVQPTPVLDENQRKVVDHEGGPLLVLAGPGTGKTTTIVEAVVDRIDNRGVDPSRI
LVLTFGRKAAQELRERITGRLRRTTREPLALTFHGYAYALIRREFQRMGDLPPRLLSGPE
QLMEIRELLRWEAADGGSAWPERLRPALETRGFAEELRDFLMRAEERGLGPDALARLGRE
RGRDDWEAAAGFLARMNGRFDIAPVPTLNYAELVRIAAGLLSDPAVQERERSAHETVFVD
EYQDTDPAQEELLQALAGDGRDLIAVGDPDQSIYGFRGAEVRGILEFPDRFRTVRRTPAP
VVALRTSRRSGSGLLAASRAVTRRLPAVASAPGRVNEHRELVPAAGVPAGSVRLLMAESP
TQEAAVIADTLRRAHLVDGVPWSDMAVLVRSATRQLPVLRRALVAASVPVAVGADELPVA
AEPIVRPLLSLIRFGLHPAELDDEAARDLLTGPFGDADAIGLRRLTRALRRLDLDRAAAE
RENGGGDGTYRPASLLLVDALREPADLTLVEPEVAAPALRIATALATVRELDARGADAEQ
VLWRLWRDSGLADRLLRASLASGRRGAAADRDLDAVVALFESAARYCDRLPPGTPEGFLA
DLAAQEIPGDSLAERAPEGESVRILTAHRSKGLEWGLVVVAGVQEGDWPDLRLRGSLLGV
EELVDADVHGADSSGAALASKLLAEERRLFYVALTRARHTLVVTAVGGDDAEQRPSRFLN
EMGAGDPEPVGTGVRWLSLPSLVADLRSVVTDRNAPGALRDAAAVHLARLAEEGVRGADP
AEWYALTPFSDDRPLAGEGDTIRVSPSQVESFTNCQLRWLLERAAGASSGDSASALGTVV
HAVAVLVAQGTPPQDISRRMDEIWADLDFGGPWQADKQRERADTMVRKLLTWDAANDREL
VVTEEGFKVDVGGIEITGRVDRLERDDQGRAVVVDIKTGAAKAEDLDRHPQLGVYQMAVL
KGAFAELGLAQPGGAMLVQLGEKLKNAREQVQRPLGEDPDPRWAQDLVTEVAAGMGGSRF
TATRNKGCRSCAVRACCPVQDEGRHV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgcccccaccgggtgcagccgacaccggtgctggacgagaaccaacgcaaggtc
gtcgaccacgagggcggccccctcctggtgctcgccggtcccggcaccggcaagaccacc
accatcgtcgaggccgtcgtcgaccgcatcgacaacaggggcgtggacccctcccgcatc
ctggtcctcaccttcggccgcaaggccgcgcaggagctgcgggagcgcatcaccgggcgg
ctgcgccgcaccacccgggagcccctcgccctgaccttccacggctacgcctacgcgctc
atccgccgcgagttccagcgcatgggcgacctgccgccccgcctgctgtccggccccgag
cagctgatggagatacgcgagctcctgcgctgggaggccgcggacggcggctccgcctgg
cccgaacgcctgcgcccggccctggagacccgcggcttcgccgaggagctgcgcgacttc
ctgatgcgcgcggaggagcgcggcctgggccccgacgccctggcccggctgggccgcgag
cgcggccgcgatgactgggaggccgcggccgggttcctggcgcggatgaacggccggttc
gacatcgcccccgtgcccaccctcaactacgccgaactggtgcggatcgccgccggactg
ctctccgaccccgcggtgcaggagcgcgagcgctcggcgcacgagaccgtgttcgtcgac
gagtaccaggacaccgacccggcccaggaggaactcctccaggccctggcgggcgacggc
cgcgacctcatcgccgtcggcgaccccgaccagtccatctacgggttccgcggcgccgag
gtgcgcggcatcctggagttccccgaccgcttccgcacggtccgccgcacgcccgccccc
gtggtggcgctgcgcacctcccgccgtagcgggtccggcctgctggccgcctcgcgggcg
gtcacccgccgcctgcccgccgtcgcctccgcgcccggccgcgtcaacgagcaccgcgaa
ctggtccccgccgccggggtgcccgccgggagcgtgcggctgctcatggccgagagcccc
acccaggaggccgcggtcatcgccgacaccctgcgccgcgcccacctggtggacggcgtc
ccctggtcggacatggccgtcctggtgcgctcggccacccgccagctgccggtgctgcgc
cgcgccctggtcgccgcgtcggtgccggtcgccgtcggcgccgacgagctgccggtggcc
gccgagcccatcgtgcggccgctgctgtccctcatccggttcgggctgcacccggccgaa
ctcgacgacgaggccgcccgcgacctgctcaccggccccttcggcgacgccgacgccatc
ggcctgcgccgcctcacccgcgccctgcgccgcctggacctggaccgggccgccgccgag
cgcgagaacggcgggggcgacgggacctaccggcccgcctccctgctgctggtggacgcc
ctgcgcgagccggccgacctcaccctggtcgagcccgaggtggccgcgcccgccctgcgc
atcgccaccgccctggccaccgtccgcgaactcgacgcccgcggcgccgacgccgaacag
gtgctgtggcggctgtggcgcgacagcggcctggccgaccggctgctgcgcgccagcctc
gccagcggccgccgcggcgccgccgccgaccgcgacctcgacgcggtggtcgccctgttc
gagagcgccgcccgctactgcgaccggctgccccccggcaccccggaggggttcctcgca
gacctggccgcccaggagatccccggcgacagcctcgccgagcgcgcccccgaaggcgag
tccgtgcgcatcctcaccgcccaccgctccaagggactggagtggggcctggtggtggtc
gccggggtccaggagggcgactggcccgacctgcgcctgcgcggttccctgctgggcgtg
gaggagctggtggacgccgacgtgcacggcgccgactcctccggggccgccctggcctcc
aagctgctcgccgaggagcgccgcctgttctacgtggccctcacccgcgcccggcacacc
ctcgtggtcaccgccgtgggcggcgacgatgccgagcagcggccctcccggttcctcaac
gagatgggcgcgggcgaccccgagcccgtcggcaccggggtgcgctggctgtcgctgccg
tccctggtcgccgacctgcgctcggtggtcaccgaccggaacgcgcccggcgccctgcgc
gacgccgccgccgtccacctggcccgcctggccgaggagggggtgcgcggggcggacccc
gccgagtggtacgccctgacacccttctccgacgaccggccgctggccggggagggcgac
accatccgggtgtcgccctcccaggtggagagcttcaccaactgccagctgcgctggctg
ctggagcgcgccgccggggcctcctccggcgactcggcgtccgccctgggcaccgtcgtg
cacgccgtcgcggtcctggtcgcccagggcaccccgccgcaggacatctcccggcggatg
gacgagatctgggccgacctcgacttcggcggcccctggcaggccgacaagcagcgcgag
cgcgccgacaccatggtccgcaaactcctcacctgggacgccgccaacgaccgcgagctc
gtcgtcaccgaggaggggttcaaggtcgacgtcgggggcatcgagatcaccggccgggtc
gaccggctcgaacgcgacgaccagggccgcgccgtcgtcgtcgacatcaagaccggcgcc
gccaaggccgaggacctggaccgccacccccagctcggcgtctaccagatggccgtcctc
aagggggccttcgccgaactcggcctggcgcagcccggcggggcgatgctcgtccagctc
ggcgagaagctcaagaacgcccgcgagcaggtccagcgccccctcggcgaggaccccgac
ccccgctgggcccaggacctcgtcaccgaggtcgccgccggtatgggcggctcccggttc
accgccacccgcaacaagggatgcaggtcgtgcgccgtgcgcgcctgctgccctgtccaa
gacgagggcagacatgtctga
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