Nocardiopsis changdeensis: KGD84_10060
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Entry
KGD84_10060 CDS
T08932
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncg03009
]
KGD84_10060
Enzymes [BR:
ncg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
KGD84_10060
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
KGD84_10060
Ribosome biogenesis [BR:
ncg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KGD84_10060
23S rRNA modification factors
KGD84_10060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QUX24575
LinkDB
All DBs
Position
2194997..2195797
Genome browser
AA seq
266 aa
AA seq
DB search
MAKRTRLDAELVRRGHARSRGHAAEIIEGGLVKVAGIVASKPATQVGQDQPIVVRTPSDE
PPYVSRGAHKLIGALDAFSLDVADRRALDAGASTGGFTDVLLRRGAAHVTAVDVGYGQLA
WSLRSNDRVRVMERVNVRELTPEMVGEPRPDLVVGDLSFISLKLVLGPLRDAVAPGADFA
MMVKPQFEVGKDRVGAGGVVREPELRAGAVADVAAHALTLGLGTVDVAASPLPGPSGNVE
YFLWLRSGAPALDAARLERAVAEGPA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgtactcggctcgacgcggaactggtccgccgcgggcacgcacgctcacgc
ggccacgcggccgagatcatcgaggggggcctggtcaaggtggccgggatcgtggcctcc
aagccggccacccaggtcggacaggaccagcccatcgtggtgcgcactccttccgacgag
cccccctatgtgtcccgcggggcgcacaagctcatcggggccctcgacgcgttctccctg
gacgtggccgaccggcgcgccctggacgcgggcgcctccaccggcgggttcaccgacgtg
ctgctgcgccggggcgcggcccacgtgaccgccgtggacgtgggctacggccagctggcg
tggtcgctgcgcagcaacgaccgggtgcgggtcatggagcgggtcaacgtccgcgagctc
accccggagatggtcggcgagccgcgcccggacctggtggtgggcgacctgtcgttcatc
tccctgaagctggtgctggggccgctgcgggacgcggtcgcccccggggccgacttcgcc
atgatggtcaagccccagttcgaggtcggcaaggaccgggtgggcgcgggcggtgtggtg
cgcgagcccgagctgcgcgccggggccgtggccgacgtggccgcccacgccctcaccctg
ggcctgggcacggtcgacgtggcggccagcccgctgcccggtccctcgggcaacgtcgag
tacttcctgtggctgcgctcgggcgccccggcgctggacgcggcccggctggagcgggcg
gtggcggaggggccggcctag
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integrated database retrieval system
