Nocardiopsis changdeensis: KGD84_10795
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Entry
KGD84_10795 CDS
T08932
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGD84_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_10795
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KGD84_10795
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KGD84_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QUX24702
LinkDB
All DBs
Position
complement(2367145..2368023)
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AA seq
292 aa
AA seq
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MSTTQRTRSPRPPSPVGAHVPVAGGMADKGLAYAAEIDAETVQVFVSNPRGWATNGGDPA
QDARMRERAGAGLPVFVHAPYLINPGTPDEQVAEKSVASLEHALRRSAAIGALGVVVHTG
SAVSGGREAGLARMRERLLPLLERLGEDVPPVLLEPMAGQGQVLCATVDDLVPYFEALEW
HPNAGVCLDTAHLFAAGHDISTREGMRTALDRFGEVVGADRLRVIHGNDSKAPCGSNRDR
HENIGAGFIGADAFGELFVHPVSAGVPIVVETPGPAGPHAADVATLKKLRDG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaacgcagcgcacccgctccccgcggcccccgtccccggtcggcgcacacgtc
ccggtcgccggcggcatggccgacaagggcctggcctacgcggccgagatcgacgccgag
accgtccaggtgttcgtgtccaacccgcgcggctgggcgaccaacgggggcgacccggcc
caggacgcgcggatgcgcgaacgggccggcgccgggctgccggtgttcgtccacgcgccc
tacctgatcaacccgggcacccccgacgagcaggtggccgagaagtcggtggcctccctg
gagcacgcgctgcgccggtccgccgcgatcggggcgctgggcgtggtcgtgcacaccggc
tcggcggtgtcgggcggccgggaggcggggctggcccgcatgcgggagcggctgctgccg
ctgctggagcgcctgggcgaggacgtcccgccggtgctgctggagccgatggccgggcag
ggccaggtgctgtgcgcgaccgtggacgacctggtgccctacttcgaggcgctggagtgg
cacccgaacgcgggcgtgtgcctggacaccgcccacctgttcgccgccgggcacgacatc
tccacccgggaggggatgcgcaccgcgctggaccggttcggcgaggtggtgggcgccgac
cggctgcgggtgatccacggcaacgactccaaggccccgtgcggcagcaacagggaccgg
cacgagaacatcggggccgggttcatcggcgccgacgccttcggggagctgttcgtccac
ccggtgagcgcgggggtgccgatcgtggtcgagacccccggcccggccgggccgcacgcc
gccgacgtggcgaccctcaagaagctccgcgacggctag
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