Nocardiopsis changdeensis: KGD84_11335
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Entry
KGD84_11335 CDS
T08932
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncg03000
]
KGD84_11335
Transcription factors [BR:
ncg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KGD84_11335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
TetR_N
HTH_Tnp_ISL3
HTH_IclR
HTH_20
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QUX24794
UniProt:
A0ABX8BUC2
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All DBs
Position
2505199..2506161
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AA seq
320 aa
AA seq
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MPQDSSHRVALIVDAGSNPFEMGVATELFGLRRPEIDRTWYTLTVCSPTPEVPVHLGLFT
LAGLAGLDAAAGADTVIVPNRPDPWTPPRPEVLAAVRTAHARGARLVSFCTGSFTLAAAG
VLDGRRAATHWRHEELFARLYPKVRLERDVLFVDDGDVLTAAGSAAALDLGLHLVRRDHG
AEAAASVSRRLVFTAHREGGQRQFVPAPLPHPADVSLAPVLDWARERLGEPLTVTDLAAR
AAVSPATLHRRFRAELGTTPLAWLRAERVLSARRLLERTDLDLSSVARSSGLGTPANLRE
AVRAHTGLSPSAYRSAFRLT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagattcctcgcaccgggtggcgctgatcgtggacgccgggtccaacccgttc
gagatgggcgtggccaccgagctgttcgggctgcgccgcccggagatcgaccggacctgg
tacacgctcaccgtctgctcgcccacccccgaggtgccggtgcacctggggctgttcacc
ctggccggcctcgcgggcctggacgccgcggccggggcggacacggtcatcgtgcccaac
cgccccgacccgtggacgccgccccgccccgaggtgctcgccgccgtgcgcacggcccac
gcccgcggggcgcgcctggtgagcttctgcacgggcagtttcacgctggcggccgcgggc
gtgctggacgggcgccgggcggccacccactggcggcacgaggagctgttcgcccggctg
tacccgaaggtgcggctggagcgcgacgtgctgttcgtggacgacggcgacgtgctcacc
gccgcgggcagcgcggccgccctggacctgggactgcacctggtccggcgcgaccacggc
gcggaggcggccgcctccgtgagcaggcggctggtgttcaccgcgcaccgggagggcggc
cagcgccagttcgtacccgctccgctcccacaccccgccgacgtttcactggcgccggtc
ctcgactgggcgcgcgaacgcctgggcgagcccctcaccgtcaccgacctggcggcccgc
gccgcggtgagcccggcgaccctgcaccggcgcttccgcgccgagctgggcaccaccccg
ctggcgtggctgcgtgcggaacgggtcctctccgcccggcgcctgctcgaacgcacggac
ctcgacctgtcctccgtggcccggtccagcggcctgggcacccccgccaacctccgcgag
gcggtccgcgcgcacaccggcctcagcccctcggcctaccgctccgcgttccgtctcacc
tga
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