KEGG   Nocardiopsis changdeensis: KGD84_12525
Entry
KGD84_12525       CDS       T08932                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
ncg  Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:ncg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncg03400]
    KGD84_12525
Enzymes [BR:ncg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     KGD84_12525
DNA repair and recombination proteins [BR:ncg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    KGD84_12525
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: QUX25008
LinkDB
Position
2793443..2794108
AA seq 221 aa
MSDTLFTGPPAEIAPGAVHLPGWLPPERQAALVERCREWAAGPAGMLRHTMPRGGRMSVA
MTSLGWFWRPYTYERTLPDGTPVRPFPAELGALAARAVEAAYGAPPAPGTPPYDVALVNF
YDADARMGMHQDRDEAALEPVVSLSLGDTCVFRFGNTETRTRPYTDVELRSGDLFVFGGP
SRLAYHGVPRTRPGTAPPALGLTGRLNITLRASGLAADPAP
NT seq 666 nt   +upstreamnt  +downstreamnt
atgagcgacaccctgttcaccgggcccccggcggagatcgccccgggggccgtccacctg
ccggggtggctgccgccggagcggcaggccgccctggtcgaacgctgccgggagtgggcg
gccgggcccgccgggatgctccgccacaccatgccgcgcggcggccgcatgtcggtggcc
atgacctcactgggctggttctggaggccctacacctacgagcgcaccctgcccgacggc
accccggtgcggcccttccccgcggaactgggcgcgctggcggcccgcgcggtggaggcc
gcctacggcgccccacccgcgcccgggaccccgccctacgacgtcgccctggtcaacttc
tacgacgccgacgcccgcatgggcatgcaccaggaccgcgacgaggcggccctggaaccg
gtggtctccctcagcctgggcgacacctgcgtcttccggttcggcaacaccgagacccgc
acccgcccctacaccgacgtggaactgcgcagcggcgacctgttcgtgttcggcggcccc
tcccgcctggcctaccacggggtgccccgtacccggcccggcaccgccccgcccgccctg
ggcctgacggggcgcctcaacatcaccctgcgcgcctccggcctggcggccgaccccgcc
ccctga

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