Nocardiopsis changdeensis: KGD84_12960
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Entry
KGD84_12960 CDS
T08932
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KGD84_12960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncg02000
]
KGD84_12960
Transporters [BR:
ncg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KGD84_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
Cation_efflux
AAA_21
AAA
AAA_28
AAA_29
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QUX25084
LinkDB
All DBs
Position
2907598..2909340
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AA seq
580 aa
AA seq
DB search
MIRDLLRAMGPGHARPMAAALALTTGVSALQGVVFALLVPVLQRLLGPDPSAAAPWALVL
AAVTAVYAVLRSAGLYVNFRVGSTISRALHHRLGDHVVRLPLGWFTGARRGELNRIATDG
VSRTTNLPVHTYPPLADAVVTPVVAVAALALFDWRLGLACAACLVVLWMVFTLTSDAVGR
GDAARDAAADEAADRVVEYARSQPVLRAFGRTEQGRAGLDRALEAEHATARTLLFKAVPA
LVAYAFAVRLALTLVLALVVYRVLGGDLSAATAVALTVLVVRFVHPLSAAAEHGASLRMA
VNGLARINAVLDARPLPEPEAPVAPQGSLVEFDDVRFSYTPGGEKVLDGVSFRAGPGSLT
ALVGPSGGGKSTAARLLARFHDVDAGRVRVGGADVRDIGGEELSRRVAVVFQDVYLFDAT
IADNVRVADPGATDGDLERVAARSGLDRVVAELPDGWNTPVGEGGASLSGGQRQRVSIAR
ALLKDAPIVVLDEASAALDAENEALLTRTAVELAGEGRTVLVIAHRPATVAAADHIVFLD
GGRVAEQGSPDELLALDGRHAAYIRARERARGWRITADRA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcgacctcctcagggccatgggccccgggcacgcccgccccatggcggcggcc
ctcgcgctcaccacaggcgtgtccgccctccagggcgtggtgttcgcgctcctggtcccc
gtcctgcaacgcctgctcgggcccgacccgtccgcggccgcgccctgggccctcgtcctc
gccgcggtcaccgccgtgtacgcggtgctgcggtcggccggcctctacgtgaacttccgg
gtggggagcaccatctcccgcgccctgcaccaccggctcggcgaccacgtggtccggctg
cccctgggatggttcaccggggcccggcgcggggagctcaaccgcatcgccaccgacggc
gtctcgcggaccacgaacctgcccgtccacacctaccccccgctcgccgacgccgtcgtc
acccccgtggtggcggtcgcggccctggccctcttcgactggcggctgggcctggcctgc
gccgcgtgcctggtggtcctgtggatggtcttcaccctgacctcggacgccgtggggcgc
ggcgacgccgcccgggacgccgcggccgacgaggccgccgaccgggtggtggagtacgcc
cggtcccagccggtgctgcgcgccttcggccgcacggagcagggccgggcgggcctggac
cgggccctggaggccgagcacgccaccgcccgcacactgctcttcaaagcggtcccggcc
ctggtcgcctacgcgttcgcggtgcgcctggccctgaccctggtcctggccctggtggtg
taccgggtgctcggcggcgacctgtccgccgccacggcggtcgcgctgaccgtgctggtc
gtcaggttcgtccacccgctgtcggcggccgccgagcacggggcctcgctgcggatggcg
gtcaacgggctggcccggatcaacgccgtactggacgcccgccccctgcccgagcccgag
gcgcccgtcgccccgcaggggtccctggtcgagttcgacgacgtccgcttctcctacacc
cccggcggggagaaggtcctggacggggtgtccttccgggccggacccggctccctgacc
gcgctcgtgggcccctccggcgggggcaagagcaccgccgcccggctgctggcccgcttc
cacgacgtcgacgcgggccgggtgcgcgtgggcggggccgacgtccgcgacatcggcggc
gaggagctgtcccggcgggtggccgtggtcttccaggacgtgtacctgttcgacgccacc
atcgccgacaacgtgcgcgtcgccgaccccggtgccaccgacggggacctcgaacgcgtc
gcggcccgctccggcctggaccgggtcgtcgccgaactccccgacggctggaacaccccg
gtgggggagggcggcgcctccctgtcgggcggccagcgccagcgggtctcgatcgcccgc
gccctgctcaaggacgcgccgatcgtggtcctggacgaggcgtcggcggcgctggacgcc
gagaacgaggcgctgctcacccggaccgccgtcgaacttgcgggggaggggcgcaccgtc
ctggtgatcgcccaccgccccgccacggtggcggccgccgaccacatcgtcttcctcgac
ggcggacgcgtcgcggaacaggggtcccccgacgaactcctcgccctggacggccgccac
gccgcctacatccgggcccgcgaacgggcccgcggatggcggatcaccgccgaccgcgcc
tga
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