Nocardiopsis changdeensis: KGD84_16560
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Entry
KGD84_16560 CDS
T08932
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KGD84_16560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_16560
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KGD84_16560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
QUX20159
LinkDB
All DBs
Position
complement(3662781..3663728)
Genome browser
AA seq
315 aa
AA seq
DB search
MVNPVWVGTLMFGEVPIGVRLYSARERRGPVLHQFERGTADRIRYVRVNERTGEEVPAEK
IVRGARTAVEDEYVVLEPEELEEILPHGSRTMRLDGFVSEGSVGPLWYASTYYMAPRDPA
DAQPYQLLYAALDRTRRAGTATVVLRDRESPVLIEPTRGVLSASTLWWPDEVRAPDDVMP
PVPYPALGKEELALAAELVDSLSVDWDPARYEDSYGHRLTELVRAKARGGTITHRPGGED
RPRRTEGSSRDGALQEALRRSLPHGRAPGPRPPARGEGRRTKRELLRRASELDVPGRSKM
NREELEEAVARAGGR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatcctgtctgggtgggcaccctcatgttcggcgaagtgccgatcggggtgcgc
ctctacagcgcccgcgagcgccgcggaccggtcctgcaccagttcgaacgcggcaccgcc
gaccgcatccgctacgtccgcgtcaacgagcgcaccggcgaggaggtccccgccgagaag
atcgtgcgcggcgcccgcaccgccgtcgaggacgagtacgtcgtcctggaaccggaggaa
ctggaggagatcctcccgcacgggtcgcgcaccatgcgcctggacgggttcgtctccgag
gggtcggtcgggcccctctggtacgcctccacctactacatggccccgcgcgaccccgcc
gacgcccagccctaccagctgctctacgcggccctggaccgcacgcgccgggcggggacg
gccaccgtcgtcctgcgcgaccgcgagtccccggtgctcatcgagccgacccgcggcgtg
ctgtccgcctccaccctgtggtggcccgacgaggtgcgcgcccccgacgacgtgatgccg
ccggtgccctaccccgcgctgggcaaggaggagctggcgctggccgccgaactggtcgac
tcgctgtcggtcgactgggacccggcccgctacgaagacagctacggccaccgcctcacc
gaactggtgcgggccaaggccaggggaggcaccatcacccaccggcccggcggggaggac
cggccgcgccggaccgaggggtcctccagggacggcgctctccaggaggcgctgcgccgc
agcctcccgcacgggcgcgcccccgggccgcgcccgcccgcccgcggcgagggccggcgc
accaagcgcgaactgctccggcgcgcctcggagctggacgtgccgggccgctccaagatg
aaccgtgaggaactggaggaggcggtggcccgcgcgggcggccgctga
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