Nocardiopsis changdeensis: KGD84_20395
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Entry
KGD84_20395 CDS
T08932
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD84_20395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncg02000
]
KGD84_20395
Transporters [BR:
ncg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KGD84_20395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
APS_kinase
Zeta_toxin
ATP-synt_ab
nSTAND3
PRK
DUF3987
Mg_chelatase
AAA_18
AAA_5
NPHP3_N
NB-ARC
EspG
NACHT
BAR
Motif
Other DBs
NCBI-ProteinID:
QUX20829
LinkDB
All DBs
Position
complement(4506750..4508507)
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AA seq
585 aa
AA seq
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MASTEPVVRVDDLRVTFPTMDGDVQAVNGLSFEVPAGGALGIVGESGSGKSVTSLALMGL
HRGSRAKITGAIEVAGKNVVTATDRQLRAMRGNDIAMVFQDPMQSLHPQYTIGNQLVEAY
RVHHPKASKSVALKRAVEALDRVGIPQPEKRINSYPHEFSGGMRQRVVIAMGLMCDPKVL
LADEPTTALDVTVQARILDLLDELRRDLGMALILVSHDLAVVAGSVDEVVVMRHGVAVER
GDVRTVLSAPEHPYTQALLAAVPRVEVSRAQRRAQDRADRLEKEKREGTVTDPAKFEAFT
PASTDGEPLLKVEDVAQRFKVRGGAMGRSTDFWAVNGVSFDLYKGETLGIVGESGSGKST
LSRMVMRLLEPTRGRVVFEGQDITHMSERALRPLRRDVQMVFQNPYSSLNPRVTVGDAIG
TALRVQGERDTKKIKREVQELLDRVGLQPNHYNRFPHAFSGGQRQRIAIARALILKPKLI
ICDEPVSALDVSTQDQVLRLLSELQDDFGLTYIFVAHDLAVVRQVSDRVAVMRKGEIVEL
GDSDSIYENPQSDYTRQLLAAAPLLDPDEARSQRAEREALRAQAV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaccgagcccgtcgtccgcgtggacgacctgcgggtgacgttcccgaccatg
gacggcgacgtccaggcggtgaacggactgtccttcgaggtgcccgccgggggcgccctc
ggcatcgtgggcgagtcgggctcgggcaagagcgtgacctcgctggccctgatgggcctg
caccgcggcagccgggcgaagatcaccggcgccatcgaggtggccgggaagaacgtggtg
accgccacggacaggcagctgcgggcgatgcgcggcaacgacatcgcgatggtcttccag
gacccgatgcagtcgctgcacccgcagtacaccatcggcaaccagctggtcgaggcctac
cgggtccaccaccccaaggcgtccaagtccgtcgcgctcaagcgcgcggtcgaggcgctg
gaccgggtggggatcccccagcccgagaagcggatcaattcgtatccgcacgagttctcc
ggtggtatgcgccagcgtgtggtgatcgcgatggggttgatgtgcgatcccaaggtgctg
ctggccgatgagccgacgacggcgctggacgtgacggtgcaggcgcggatcctggacctg
ttggacgagctgcgccgggatctggggatggccctgatcctggtctcgcacgacctggcc
gtggtggcggggtcggtggacgaggtcgtggtgatgcgccacggtgtggcggtggagcgc
ggggacgtgcgcacggtgctgtcggcgccggagcacccctacacgcaggcgctgctggcg
gcggtgccgcgggtggaggtctcccgggcccagcgccgcgcccaggaccgcgccgaccgc
ctggagaaggagaagcgcgaggggaccgtcaccgacccggcgaagttcgaggcgttcacc
cccgcctccaccgacggcgagccgctgctcaaggtcgaggacgtcgcccagcgcttcaag
gtgcgcggcggggccatgggccgctccaccgacttctgggccgtcaacggcgtcagcttc
gacctgtacaagggtgagacgctggggatcgtgggcgagtcgggctcgggcaagagcacg
ctgtcgcggatggtcatgcgcctgctggagcccacccggggccgggtggtcttcgagggc
caggacatcacgcacatgtccgagcgcgcgctgcgtccgttgcggcgtgatgtgcagatg
gtgttccagaacccgtactcgtcgctgaacccgcgtgtgacggtgggcgacgcgatcggg
acggcgctgcgggtgcagggcgagcgcgacaccaagaagatcaagcgcgaggtgcaggag
ctgctggaccgggtcgggctccagccgaaccactacaaccggttcccgcacgcgttctcg
ggcggtcagcgccagcggatcgcgatcgcgcgggcgctgatcctcaagcccaagctgatc
atctgcgacgagccggtgtcggcgctggacgtgtccacccaggaccaggtgctgcgtctg
ctgtcggagctgcaggacgacttcgggttgacctacatcttcgtggcccacgacctggcg
gtggtgcgccaggtcagcgaccgggtcgcggtgatgcgcaagggcgagatcgtggagctg
ggcgacagcgactccatctacgagaacccgcagagcgactacacccgccagctgctggcg
gccgctccgctgctggacccggacgaggcccgcagccagcgcgccgagcgcgaggcgctg
cgcgcccaggccgtctag
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