Nocardiopsis changdeensis: KGD84_20930
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Entry
KGD84_20930 CDS
T08932
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncg03051
]
KGD84_20930 (pafA)
Enzymes [BR:
ncg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KGD84_20930 (pafA)
Proteasome [BR:
ncg03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KGD84_20930 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QUX20920
UniProt:
A0ABX8BGM9
LinkDB
All DBs
Position
complement(4622730..4624088)
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AA seq
452 aa
AA seq
DB search
MERRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSLVDLVAHDKAGERILEGLQVDAEQRLHEEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRHGEFGRLADVLIPFLVTRQIICGAGKVLQTPRGALYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTTLLKLGSTDLVLRMIEAGVVM
RDYTLENPIRAIREVSHDMTGRRKVRLANGREAGALEIQREYLEKVQSYVDRHGTDATGK
RVLELWQRTLEAVETQNLESVSREIDWVAKYMLLERYRAKHDLSLSSPRIAQLDLTYHDI
HRDRGLFYLMQNRGQMERVVGDLKIFEAKSVPPQTTRARLRGEFIRRAQEQRRDFTVDWV
HLKLNDQAQRTVLCKDPFKSVDERVEKLIAGM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgacggatcttcgggctggagaacgagtacggggtcacgtgcaccttccgggga
cagcgccggctgtcgccggacgaggtcgcccgctacctcttccggagggtggtctcctgg
gggcgcagcagcaacgtgttcctccgcaacggcgcccgcctctacctggacgtgggcagc
caccccgagtacgccacccccgagtgcgacagcctcgtggacctggtggcgcacgacaag
gccggcgagcgcatcctggaggggctgcaggtcgacgccgagcagcgcctgcacgaggag
ggcatcgccggggacatctacctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctcgtgggccggcacggggagttcgggcggctggccgacgtg
ctcatccccttcctggtcacccggcagatcatctgcggggccggaaaggtcctgcagacc
ccgcgcggcgccctgtactgcgtcagccagcgtgccgagcacatctgggagggcgtctcc
tccgccaccaccaggtcccggccgatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgcttccgccgcctgcacgtcatcgtcggcgactccaacatgagcgagaccaccacc
ctgctcaagctgggctccaccgacctggtgctgcggatgatcgaggcgggcgtggtcatg
cgcgactacaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatgacc
ggccgccgcaaggtgcgcctggccaacgggcgcgaggcgggcgcgctggagatccagcgc
gagtacctggagaaggtgcagagctacgtcgaccggcacggcaccgacgcgaccggcaag
cgggtcctggagctgtggcagcgcaccctggaggcggtcgagacccagaacctggagtcg
gtctcccgggagatcgactgggtcgccaagtacatgctgctggagcgctaccgcgccaag
cacgacctgtccctgtcctcgccccggatcgcccagctcgacctgacctaccacgacatc
caccgcgaccgcggcctgttctacctgatgcagaaccgcggccagatggagcgggtggtc
ggcgacctgaagatcttcgaggccaagtcggtgcccccgcagaccacgcgggcccggctg
cgcggcgagttcatccgccgcgcccaggagcagcgccgcgacttcaccgtcgactgggtg
cacctcaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggaccccttcaagtcg
gtggacgagcgggtggagaagctcatcgccgggatgtga
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