Nocardiopsis changdeensis: KGD84_22425
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Entry
KGD84_22425 CDS
T08932
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_22425
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KGD84_22425
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QUX21180
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Position
4966625..4967029
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AA seq
134 aa
AA seq
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MRGNRSRDTKPELALRRLVHAVGLRYRVAAKPLPKMRRTADLLFRPTRVAVFVDGCFWHG
CPDHFVPPKTNPGYWEDKISGNVSRDRDTDALLEEAGWLVLRFWEHQDPAECAEIVVEAV
SARKGELQRPRRLG
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcaaccgcagccgcgacaccaagcccgaactcgccctccgcagactggtccac
gccgtcggcctgcgctaccgggtggcggccaagccgctacccaagatgcggcggaccgca
gacctgctgttccgccccacccgggtggcggtgttcgtggacggctgcttctggcacggc
tgcccggaccacttcgttccgcccaagaccaatcccgggtactgggaggacaagatcagc
ggcaacgtcagccgggaccgcgacaccgacgccctgttggaggaggcgggatggctggtg
ctgcgcttctgggagcaccaggaccccgccgagtgcgccgagatcgtcgtcgaggccgtc
tcagcccgtaagggcgagctgcagcggccccgtcggctcggttag
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