Nocardiopsis changdeensis: KGD84_23310
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Entry
KGD84_23310 CDS
T08932
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg00750
Vitamin B6 metabolism
ncg01100
Metabolic pathways
ncg01240
Biosynthesis of cofactors
Module
ncg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KGD84_23310 (pdxS)
Enzymes [BR:
ncg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KGD84_23310 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
His_biosynth
DHO_dh
NMO
IGPS
Motif
Other DBs
NCBI-ProteinID:
QUX21335
UniProt:
A0ABX8BGH5
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All DBs
Position
complement(5166496..5167428)
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AA seq
310 aa
AA seq
DB search
MGRESTTVADNAATTPDGAVGTQRVKRGMAEQLKNGVIMDVVTPDQAKIAEDAGAVAVMA
LERVPADIRKDGGVARMSDPDMIDGIIEAVSIPVMAKVRIGHFVEAQVLQSLGVDFIDES
EVLTPADEAHHIDKWAFTVPFVCGATELGEALRRIAEGAAMIRSKGEAGTGNVVEATRHM
RSIRAAIKRLGTLDEAELFGAAKELRAPYDIVKEVAELGKLPVPLFSAGGVATPADAALM
RQLGAESVFVGSGIFKSGDPAKRADAIVQATLHYEDPAVIARVSRGLGEAMVGINLDELS
DSQRYAGRGW
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggagtccaccaccgtggctgacaacgcagcgaccacccccgacggcgcagtc
ggtacccagcgcgtcaagcggggcatggccgagcagctcaagaacggcgtcatcatggac
gtcgtcacgccggaccaggccaagatcgccgaggacgccggtgccgtcgcggtcatggcc
ctggagcgcgtccccgccgacatccgcaaggacggcggggtggcccgcatgtccgacccc
gacatgatcgacgggatcatcgaggccgtctcgatcccggtcatggccaaggtccgcatc
ggccacttcgtcgaggcgcaggtcctccagagcctgggcgtcgacttcatcgacgagtcc
gaggtcctgacccccgccgacgaggcccaccacatcgacaagtgggcgttcaccgtgccg
ttcgtctgcggcgccaccgagctgggcgaggccctgcgccgcatcgccgagggcgcggcc
atgatccgctccaagggcgaggccggcaccggcaacgtcgtcgaggccacccgccacatg
cggtccatccgcgcggcgatcaagcgcctgggcaccctggacgaggccgagctgttcggc
gccgccaaggagctgcgcgccccctacgacatcgtcaaggaggtggccgagctgggcaag
ctcccggtcccgctgttctccgcgggcggcgtggccacccccgccgacgccgcgctcatg
cgccagctcggcgccgagagcgtgttcgtcggctcgggcatcttcaagtccggcgacccg
gccaagcgcgccgacgccatcgtgcaggccaccctccactacgaggaccccgccgtcatc
gcgcgcgtctcgcgcggcctgggcgaggccatggtcggcatcaacctggacgagctgtcc
gactcccagcggtacgccgggcgcggctggtag
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