Nocardiopsis changdeensis: KGD84_24465
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Entry
KGD84_24465 CDS
T08932
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KGD84_24465 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncg03019
]
KGD84_24465 (orn)
03009 Ribosome biogenesis [BR:
ncg03009
]
KGD84_24465 (orn)
Messenger RNA biogenesis [BR:
ncg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KGD84_24465 (orn)
Ribosome biogenesis [BR:
ncg03009
]
Eukaryotic type
Pre-60S particles
RNases
KGD84_24465 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QUX21532
UniProt:
A0ABX8BKI2
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All DBs
Position
5455070..5455708
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AA seq
212 aa
AA seq
DB search
MNDSLVWIDCEMTGLDFENDALIEVACLITDGELNILDEGIDVVIKPPQAALDAMGDFVR
DMHTTSGLLAELDKGVTLQEAEDAVLEHIRRYVPEPGKAPLCGNSIATDRTFLARDMKRI
DEHLHYRMVDVSSIKELLRRWYPRVYYASPDKNGGHRALADITESIRELRYYRAAAFVPE
PGPNSATARAIAADVVAGGTGRVEPREDAPEN
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacagtttggtgtggatcgactgcgagatgacgggcctcgacttcgagaacgac
gcgctgatcgaggtggcctgtctgatcaccgacggggagctcaacatcctcgacgagggc
atcgacgtcgtgatcaaacccccgcaggccgcactggacgccatgggcgacttcgtacgc
gacatgcacaccacctccgggctgctcgccgagctcgacaagggcgtgaccctccaggag
gccgaggacgccgtcctggagcacatccgccgctacgtccccgagccgggcaaggccccg
ctgtgcggcaactccatcgccacggaccgcaccttcctcgcccgcgacatgaagcggatc
gacgagcacctccactaccggatggtcgacgtctcctccatcaaggagctgctgcgccgc
tggtacccgcgcgtctactacgcgagcccggacaagaacggcggccaccgcgccctcgcc
gacatcaccgagagcatccgtgagctgcgttactatcgcgccgccgcgttcgtccccgag
ccgggcccgaactccgccacggcccgcgccatcgccgccgacgtggtcgccggcggcacc
ggccgcgtggagccgcgcgaggacgctccggaaaactga
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