Nocardiopsis changdeensis: KGD84_25320
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Entry
KGD84_25320 CDS
T08932
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg00260
Glycine, serine and threonine metabolism
ncg00460
Cyanoamino acid metabolism
ncg00630
Glyoxylate and dicarboxylate metabolism
ncg00670
One carbon pool by folate
ncg00680
Methane metabolism
ncg01100
Metabolic pathways
ncg01110
Biosynthesis of secondary metabolites
ncg01120
Microbial metabolism in diverse environments
ncg01200
Carbon metabolism
ncg01230
Biosynthesis of amino acids
ncg01240
Biosynthesis of cofactors
ncg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KGD84_25320
09102 Energy metabolism
00680 Methane metabolism
KGD84_25320
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KGD84_25320
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KGD84_25320
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KGD84_25320
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KGD84_25320
Enzymes [BR:
ncg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KGD84_25320
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
SelA
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QUX21680
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Position
5672041..5673309
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AA seq
422 aa
AA seq
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MATDNTLNQSLSELDPEVAAAVDAELGRQRDTLEMIASENFAPQAVIEAQGTVLTNKYAE
GYPGRRYYGGCEHVDVVEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLKPGDTIL
GLDLAHGGHLTHGMRINYSGKVLNAVAYHVRDEDGTVDYDEVAALAKEHQPKMIVAGWSA
YPRQLDFARFREIADSVGALLMVDMAHFAGLVAAGLHPNPVPFADVVTTTTHKTLGGPRG
GLILTKADLAKKINSAVFPGMQGGPLEHVIAAKAVALKVAAGEEFADRQRRTVSGAKLLA
ERLTRPDAAEAGVKVASGGTDVHLVLVDLVDSELNGQEAEDRLHAIGITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDEDFTEVADVIAEALKPEFDAESLRARVRALTEKYPLYP
NL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacaacacgctcaaccagagcctgagcgaactcgacccggaagtcgcggcc
gccgtcgacgccgaactgggccgccagcgcgacacccttgaaatgatcgcctcggagaac
ttcgccccgcaggccgtcatcgaggcgcagggcaccgtcctgaccaacaagtacgcggag
ggctaccccggccgccgctactacggcgggtgcgagcacgtcgacgtcgtcgagcagctc
gccatcgaccgggccaaggccctgttcggcgccgagcacgccaacgtgcagccgcactcg
ggcgcccaggccaacacggccgtgtacttcgccctgctcaagccgggcgacaccatcctc
ggtctggacctggcccacggcggccacctgacccacgggatgcgcatcaactactccggc
aaggtcctcaacgccgtggcgtaccacgtgcgcgacgaggacggcaccgtcgactacgac
gaggtcgccgcactggccaaggagcaccagcccaagatgatcgtcgcgggctggtccgcc
tacccgcggcagctggacttcgcccggttccgggagatcgccgactccgtgggcgccctg
ctcatggtcgacatggcgcacttcgccggcctggtcgcggcgggcctgcaccccaacccg
gtgccgttcgccgacgtggtcaccaccaccacgcacaagaccctgggcggcccgcgcggc
gggctgatcctcaccaaggccgacctggccaagaagatcaactccgcggtgttccccggc
atgcagggcggtccgctggagcacgtgatcgcggccaaggccgtggcgctcaaggtcgcg
gcgggcgaggagttcgccgaccgccagcgccgcaccgtgtccggggccaaactgctcgcc
gagcggctgacccggccggacgccgccgaggccggcgtcaaggtggcctccggggggacg
gacgtgcacctggtgctggtcgacctggtggactccgagctcaacggccaggaggccgag
gaccggctgcacgccatcgggatcacggtcaaccgcaacgcggtgcccaacgacccgcgg
ccgccgatggtcacctcgggtctgcggatcggcacccccgcgctggccacgcgcgggttc
ggcgacgaggacttcaccgaggtcgccgacgtcatcgccgaggccctcaagccggagttc
gacgccgagtcgctgcgcgcccgggtccgggccctgaccgagaagtacccgctctacccc
aacctgtag
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