Nocardiopsis changdeensis: KGD84_25885
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Entry
KGD84_25885 CDS
T08932
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg00300
Lysine biosynthesis
ncg00470
D-Amino acid metabolism
ncg01100
Metabolic pathways
ncg01110
Biosynthesis of secondary metabolites
ncg01120
Microbial metabolism in diverse environments
ncg01230
Biosynthesis of amino acids
Module
ncg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KGD84_25885 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KGD84_25885 (lysA)
Enzymes [BR:
ncg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KGD84_25885 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
QUX21778
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All DBs
Position
complement(5794148..5795533)
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AA seq
461 aa
AA seq
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MSRYAHPAGSRHAEILPEDNPPLPPEDLNALDPRVWPATARREDGALVVGGVDVRELADT
YQTPLFVMDEEDFRARARDYATAFAGSDVYYAGKALLTKAVARWVIEEGLKLDVCSGGEL
AVALAAGVPADRIGMHGNNKSERELHRAVEAGVGRIIIDSLDEIERLERVAAGLDRTPKV
LIRVTTGVEAHTHEFVATAHDDQKFGFALSTGAAAEAVRRVLDAPHLDLVGLHSHIGSQI
FDTSGFEVAARRVTRFLAGIHTDLGVTLAELDLGGGLGIAYTSDDTPLDPKTIADGLTSI
VRRECEEAGLPVPRLAVEPGRAIAGPPGVTVYEVGTVKDVEGIRTYVSVDGGMSDNIRTA
LYGAEYTGRLVSRESAAGPMLSRLVGKHCESGDIIVHDLYLPADLRPGDLVAVAATGAYC
LSMASNYNHLPRPAMVAVRDGAARVIVRRETEEDLLRLDVG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgcccaccccgccggatcccgtcacgcggagatcctccccgaggacaac
ccgccgctgccgcccgaggacctcaacgccctcgacccccgggtgtggcccgccaccgca
cgccgtgaggacggcgccctggtcgtgggcggcgtcgatgtccgcgagctggcggacacc
taccagacgcccctcttcgtcatggacgaggaggacttccgggcgcgcgcccgcgactac
gccacggcgttcgccgggtccgacgtctactacgcgggcaaggccctgctgaccaaggcg
gtcgcccgctgggtgatcgaggagggcctcaagctcgacgtctgctcgggcggcgagctg
gcggtcgccctggccgccggggtgcccgccgaccgcatcggcatgcacggcaacaacaag
tcggagcgcgagctgcaccgggcggtcgaggccggcgtcggccggatcatcatcgactcg
ctggacgagatcgagcgcctggagcgcgtcgccgccgggctggaccgcaccccgaaggtc
ctgatccgcgtcaccaccggtgtcgaggcccacacccacgagttcgtggccaccgcccac
gacgaccagaagttcggcttcgcgctgagcacgggcgcggccgccgaggcggtccgccgg
gtgctggacgcgccgcacctggacctggtgggcctgcactcgcacatcggctcccagatc
ttcgacacctccggcttcgaggtggccgcccgccgcgtcacccgtttcctcgccgggatc
cacaccgacctgggcgtcaccctggccgagctggacctgggcggcggcctgggcatcgcc
tacacctccgacgacaccccgctggaccccaagaccatcgccgacggcctgacgtcgatc
gtgcgccgcgagtgcgaggaggccgggctgccggtgccgcgcctggccgtggagccgggc
cgcgccatcgcgggcccgcccggggtcaccgtctacgaggtcggcacggtcaaggacgtc
gagggcatccgcacctacgtcagcgtcgacggcggcatgagcgacaacatccgcaccgcc
ctgtacggcgccgagtacaccggccgcctcgtctcgcgcgagagcgccgccgggccgatg
ctgtcccgcctggtgggcaagcactgcgagagcggcgacatcatcgtgcacgacctgtac
ctgccggccgacctgcgcccgggcgacctcgtcgcggtcgcggccaccggcgcgtactgc
ctctccatggcgagcaactacaaccacctgccgcggcccgcgatggtcgcggtccgggac
ggtgccgcccgcgtgatcgtgcgcagggagaccgaggaggacctcctccgcctggacgtc
ggctga
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