Nocardiopsis changdeensis: KGD84_26455
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Entry
KGD84_26455 CDS
T08932
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncg03036
]
KGD84_26455 (smc)
Chromosome and associated proteins [BR:
ncg03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
KGD84_26455 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Csm2_III-A
Motif
Other DBs
NCBI-ProteinID:
QUX21880
LinkDB
All DBs
Position
complement(5929147..5932692)
Genome browser
AA seq
1181 aa
AA seq
DB search
MYLKNLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTSTRPALGRAEVSLTIDNTDGALPIDYTEVTIKRTMFRNGGSEYAINGDTCR
LLDIQDLLSDSGIGREMHVIVGQGQLDTVLHAGPEERRSLVEEAAGILKHRKRKEKAIRK
LNAMQGNLDRVTDLTAELRRQLKPLGRQAELARRAAVIQADLRDSRLRLLADDIVTLTEQ
LAKEEADEKDVLRRRAAVEASLAQAQERESELEAQAAEAAPALARATETYHALSRLTERL
DAVRGLAAERFRNLASVGDEPAHRRDPAELEMEAEEAAAQEEELLARLDEAREVLETAVA
ERSAAEDALYREEKRLEAAGRAAAERREQLVRLSASVEGLRGRLSSGEAEITRLEEAAAQ
AAERAEQAQAEYEMAAEEAAGLDEGDAELDAAQEEAAAALAAVESELNRLRDAERSAEGE
RAALAARKEALELGLAGRDGAAALLGSDLPGLLGSLASLVQVEPGREAAVAAALGAAAGA
VAVADPDTAVAALELLRAEDAGRAGIVIAGAVPAVPRADWPQPPPGVRYAVDAVTAPEHL
AGPVTALLDRVLLAADLAAARDLVAKLPAVRAVTPDGDVLAGALAHGGSAAAPSLLEVQA
AVDEAAARLETATAAAAAAAEELDAAKAERAELSARVQELAARRRQGERKRNETAQRLGK
LGGQARSAEAESARYAAAAAKAAAARAEDVEKLARLEERHAEAEEMTASLEEEAPDPEVR
DELSAQASRARAAEMERRLAVRTAEERARAVAGRAEQLLVQAAEERRAAERAAQRRALRG
AQATLAEAVAEGARLALERIAASLAAAESERGAAEAGKEARDAELRTVRARVRELSVDLE
KLTGSAHSGEMARAERRLRLEQLETKAMEEMGVDVPTLVAEYGPTVPVPPPAEAGEDGVP
VPYVREVQLKRAKAAERQLNQLGKINPLALEEFAALEERHAFLNAQLEDLKKTRRDLMDI
VQEVDARVQEVFASAYLDVEREFSAIFGRLFPGGEGRLLLTDPDDMLTTGIEVEARPPGK
KVKRLSLLSGGERSLTAVAFLAAIFKARPSPFYVMDEVEAALDDTNLQRLLVIFEELRES
SQLIVITHQKRTMEAADALYGVTMQGDGISQVISQKIERSA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagaatctgacgctgcgcggcttcaagtcgttcgcgtcggccaccaccctg
cgcttcgaaccgggcatcacctgtgtggtgggccccaacggctcgggcaagtccaatgtc
gtcgacgccctgtcctgggtgatgggcgagcagggtgccaagtcgctgcgcggcggcaag
atggaggacgtcatcttcgcggggacctccacccgccccgcgctgggccgcgccgaggtc
agcctcaccatcgacaacaccgacggcgcgctgcccatcgactacaccgaggtcaccatc
aagcggaccatgttccgcaacggcggctcggagtacgcgatcaacggcgacacctgccgc
ctcctcgacatccaggacctgctcagcgactccggcatcggccgcgagatgcacgtcatc
gtcggccagggccagctcgacaccgtcctgcacgccggccccgaggagcgccgctcgctg
gtggaggaggccgcgggcatcctcaagcaccgcaagcgcaaagagaaggcgatccgcaag
ctcaacgcgatgcagggcaacctggaccgggtcaccgacctcaccgccgagctgcgccgc
cagctcaagccgctgggccgccaggccgagctggcccgccgggccgccgtcatccaggcc
gacctgcgcgactcccggctgcggctgctcgccgacgacatcgtcaccctcaccgagcag
ctcgccaaggaggaggccgacgagaaggacgtcctgcgccgccgggcggcggtggaggcc
tccctcgcccaggcccaggagcgcgagtccgagctggaggcccaggccgccgaggccgcc
cccgccctggcccgcgccaccgagacctaccacgcgctgtcccggctcaccgagcgactg
gacgccgtgcgcggactggccgccgagcgcttccgcaacctcgcctccgtcggcgacgag
cccgcccaccggcgcgaccccgcggaactggagatggaggccgaggaggccgcggcccag
gaggaggagctgctggcccgcctggacgaggcccgcgaggtcctggagaccgccgtcgcc
gagcgcagcgccgccgaggacgccctgtaccgcgaggagaagcgcctggaggccgcgggc
cgggccgccgccgagcgccgcgagcagctggtccgcctgtcggcgagcgtggaggggctg
cgcggccgcctgtcctccggcgaggccgagatcacccggctggaggaggccgccgcccag
gccgccgaacgcgccgagcaggcccaggccgagtacgagatggccgcagaggaggcggcg
ggcctcgacgagggcgacgccgagctggacgccgcccaggaggaggccgccgccgcgctc
gccgcggtcgagtccgagctgaaccggctgcgcgacgccgagcgctccgccgagggcgag
cgggccgcgctggccgcccgcaaggaggccctcgaactggggctggcgggcagggacggc
gccgccgccctgctcggctccgacctgcccggactgctcggctcgctggcgtccctggtc
caggtggagcccggccgggaggccgcggtggccgccgcgctgggcgcggccgccggcgcc
gtcgcggtcgccgaccccgacaccgccgtcgccgccctcgaactcctgcgcgccgaggac
gcgggccgggccgggatcgtcatcgccggggccgtgcccgccgtgccgcgcgccgactgg
ccccagcccccgcccggggtccgctacgcggtggacgcggtcaccgcccccgagcacctg
gccgggccggtcaccgcgctgctggaccgggtgctgctcgccgccgacctggccgccgcc
cgcgacctggtcgccaagctgcccgcggtgcgggccgtcacccccgacggcgacgtgctg
gccggggcgctggcccacggcggctcggccgccgcgcccagcctgctggaggtccaggcc
gccgtcgacgaggccgccgccaggctggagaccgccaccgcggccgcggccgccgcggcc
gaggagctggacgccgccaaggccgagcgggccgagctgtccgcccgggtccaggagctg
gcggcccgccgccgccagggcgagcgcaagcgcaacgagaccgcccagcgcctgggcaag
ctcggcgggcaggcccgctccgccgaggccgagtccgcgaggtacgccgctgcggcggcc
aaggcggccgccgcccgcgcggaggacgtcgagaagctggcccggctggaggagcggcac
gccgaggccgaggagatgaccgcctccctggaggaggaggcccccgacccggaggtgcgc
gacgagctgtccgcgcaggcctcgcgcgcccgcgccgccgagatggagcgccgcctggcg
gtgcgcaccgccgaggagcgcgcccgcgccgtcgcgggccgcgccgagcagctgctcgtc
caggccgccgaggagcggcgggccgccgagcgcgcggcacagcgccgcgccctgcgcgga
gcgcaggccaccctcgccgaggccgtcgccgagggcgcccgcctggccctggagcgcatc
gccgcctcgctggccgccgccgagtccgagcggggcgccgccgaggcgggcaaggaggcc
cgcgacgccgagctgcgcaccgtgcgcgcccgcgtccgcgagctgtccgtcgacctggag
aagctcaccggttcggcgcacagcggcgagatggcccgcgccgagcgccgcctgcgcctg
gagcagctggagaccaaggcgatggaggagatgggcgtggacgtgcccaccctcgtcgcc
gagtacggtccgaccgtcccggtgccgccgcccgccgaggcgggcgaggacggcgtcccg
gtgccgtacgtgcgcgaggtccagctcaagcgggccaaggcggccgagcgccagctcaac
cagctgggcaagatcaacccgctggcgctggaggagttcgccgctctggaggagcggcac
gccttcctcaacgcccagctggaggacctcaagaagacccggcgcgacctcatggacatc
gtccaggaggtggacgcccgcgtgcaggaggtgttcgcctccgcctacctggacgtggag
cgcgagttctcggcgatcttcggccggctgttcccgggcggtgaggggcggctgctgctc
accgaccccgacgacatgctcaccaccggcatcgaggtggaggcccgcccgcccggcaag
aaggtcaagcggctgtcgctgctgtcgggcggcgagcgctcgctgaccgcggtggcgttc
ctggcggcgatcttcaaggcccgcccgtcgccgttctacgtgatggacgaggtcgaggcg
gccctggacgacaccaacctccagcggctgctggtgatcttcgaggagctgcgggagtcc
tcccagctcatcgtcatcacccaccagaagcgcaccatggaggcggccgacgcgctgtac
ggcgtcaccatgcagggcgacggcatctcgcaggtcatcagccagaagatcgagcgctcc
gcctga
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