Nocardiopsis changdeensis: KGD84_26470
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Entry
KGD84_26470 CDS
T08932
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGD84_26470 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_26470 (mutM)
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KGD84_26470 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KGD84_26470 (mutM)
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KGD84_26470 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QUX21883
LinkDB
All DBs
Position
complement(5934107..5934967)
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AA seq
286 aa
AA seq
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MPELPEVEVVRRGLAAHAVGRTVAGVEVLHPRAVRRHTPGPADFAARLEGRTPTAALRRG
KYMWLALDDGSMLLAHLGMSGQMLVQPQGKPDEKHLRVRLPLSDGNELRFVDQRTFGHLM
VDVPGERADVPASVDHIALDPLDAEFVPEAFVRALRARDTEVKRALLDQSLISGVGNIYA
DEALWRSGLHGRRGTRGLTRAQATELLGHVRDVMTEALAVGGTTFDGLYVNVNGESGYFA
RGLNAYGREDRPCGRCASPIVRESFMNRSSFSCPSCQRPPRRSRTA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggtcgtacgccgggggctggccgcccacgccgtggga
cgcaccgtcgccggggtcgaggtcctgcacccccgcgcggtgcgcaggcacacccccggc
cccgccgacttcgcggcccggctcgaggggcgcacccccacggccgcgctgcgccgcggc
aagtacatgtggctggccctggacgacgggtcgatgctcctggcccacctggggatgagc
ggccagatgctggtccagccgcagggcaagccggacgagaagcacctgcgggtgcggctg
ccgctgtcggacggcaacgagctgcggttcgtcgaccagcgcaccttcggccacctgatg
gtggacgtgccgggggagcgggcggacgtgccggcgtcggtcgaccacatcgccctggac
ccgctggacgcggagttcgtcccggaggcgttcgtgcgcgcgctgcgcgccagggacacc
gaggtcaagcgggcgctgctggaccagtcgctgatcagcggcgtgggcaacatctacgcc
gacgaggccctgtggcggtccggcctgcacgggcggcgcggcacccgggggctgacccgg
gcccaggcgaccgaactgctggggcacgtgcgcgacgtcatgacggaggcgctggcggtg
ggcggcaccaccttcgacgggctctacgtcaacgtcaacggcgagagcggctacttcgcc
cggggactcaacgcctacgggcgggaggaccggccgtgcggccggtgcgcctccccgatc
gtgcgggagtcgttcatgaaccgctcctcgttcagctgcccctcgtgccagagacccccg
cggaggtcccgcaccgcctga
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