Nocardiopsis changdeensis: KGD84_26590
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Entry
KGD84_26590 CDS
T08932
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncg03032
]
KGD84_26590
03036 Chromosome and associated proteins [BR:
ncg03036
]
KGD84_26590
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_26590
DNA replication proteins [BR:
ncg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KGD84_26590
Chromosome and associated proteins [BR:
ncg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KGD84_26590
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KGD84_26590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QUX21903
LinkDB
All DBs
Position
complement(5958574..5958855)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKRDLIDAISDRLGDKKTATEAVNAVLETIQATVASGDKVAITGFGVFEKAERAARTAR
NPATGATIDVPASFVPKFRAGADFKALVNGDKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgtgacctgatcgacgcgatctccgaccgactcggagacaagaagaccgcg
accgaagcggtcaacgctgtgcttgagaccattcaggccaccgtggcgtcgggcgacaag
gtcgccatcaccggcttcggtgttttcgagaaggccgagcgggccgcgcgcaccgctcgc
aaccccgccaccggcgccaccatcgacgttcccgcgagcttcgttccgaagttccgggcc
ggcgccgacttcaaggcactcgtcaacggggacaagaagtag
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integrated database retrieval system
