Nocardiopsis changdeensis: KGD84_27465
Help
Entry
KGD84_27465 CDS
T08932
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGD84_27465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncg03000
]
KGD84_27465
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_27465
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KGD84_27465
Transcription factors [BR:
ncg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KGD84_27465
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KGD84_27465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QUX22058
LinkDB
All DBs
Position
6167091..6168527
Genome browser
AA seq
478 aa
AA seq
DB search
MMDDEQRYRAVHGRDSRFDGMFYTAVRTTGVYCRPSCPARTPKRQNVDFYPTAAAAQEAG
FRACKRCRPELTPGSPEWNIRADVVGRAMRLIQDGAVDRGGVSEVASSVGYSERQLNRLL
TAELGAGPLALARTERARTARTLVETTDMPMTDIAFAAGFSSVRQFNETMRAMFDRAPTE
MRGRTVRPGSDTITLRLAYRAPFDLDRTLAFLGARAVPGVEEFHGGVYRRTLRLPHGPAT
AELSAGTGHVLCRLRLADTRDLMGAVRRCRRLLDLDADPQAVAETFAGDPLLGPLSARFP
GLRSPGHPDPAELAVRAVLGQQVSVAAARTLAGRLVLAHGDPLAPELRTGGLTHLFPAPA
ALAAVDPEDLPLPRTRAATLTGLAAALASGGVDLGPGCDRDDTERRLQELRGIGPWTAAY
VRMRGLGDPDVFLGTDLGVRKALTGGAPAGGTGPGPDPDDKVWSPWRSYATHLLWASL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgatgagcagcgctaccgcgccgtacacggcagggactcccggttcgacggg
atgttctacacagcggtgcgcaccaccggtgtctactgccgtcccagttgcccggcgcgc
acccccaagaggcagaacgtcgacttctacccgacggccgccgccgcccaggaggcgggc
ttccgcgcctgcaagcggtgccgccccgagctcacccccggctcgcccgagtggaacatc
cgcgccgacgtggtgggccgcgccatgcggctcatccaggacggcgccgtcgaccgcggc
ggcgtgagcgaggtcgcgtcctcggtcggctacagcgaacgccagctcaaccggctgctc
accgccgaactcggcgccgggccgctggcgctggcccgcaccgagcgggcgcgcacggcg
cgcacgctggtggagaccacggacatgccgatgaccgacatcgcgttcgccgccgggttc
tccagcgtgcggcagttcaacgagaccatgcgcgcgatgttcgaccgggctcccaccgag
atgcgcgggcgcaccgtgcgcccgggctcggacacgatcacgctgcgcctggcctaccgg
gcgccgttcgacctcgaccgcaccctcgccttcctcggcgcccgagccgtcccgggcgtc
gaggagttccacggcggcgtctaccggcgcacgctgcgcctgccgcacggccccgccacc
gcggagctgtccgcgggcaccgggcacgtgctgtgccgcctgcgcctggccgacacccgc
gacctgatgggggcggtgcgccgctgccgtcgcctgctggacctggacgccgacccgcag
gccgtcgccgagacgttcgccggcgaccccctgctcggcccgctgtccgcccgcttcccg
gggctgcgctccccgggccacccggacccggccgaactggccgtgcgcgcggtcctgggc
cagcaggtgtccgtggccgccgcccgcacgctcgcgggccgcctggtcctggcgcacggc
gaccccctggccccggagctgcgcaccggcggcctcacccacctgttccccgcccccgcg
gcgctggccgcggtcgacccggaggacctgccgctgccgcgcacccgcgccgccaccctc
accgggctggccgccgccctcgcctcgggcggggtcgacctgggcccgggctgcgaccgc
gacgacaccgagcgccgcctccaggagctgcggggcatcgggccgtggaccgccgcctac
gtgcgcatgcgcggcctgggcgacccggacgtgttcctgggcaccgacctgggcgtgcgc
aaggcgctcaccggcggggcgccggccgggggcaccggtcccggtcccgaccccgacgac
aaggtgtggagcccctggcgctcctacgccacccacctgctgtgggcctcactgtga
DBGET
integrated database retrieval system
