Nocardiopsis changdeensis: KGD84_28005
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Entry
KGD84_28005 CDS
T08932
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncg03016
]
KGD84_28005 (truA)
Enzymes [BR:
ncg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KGD84_28005 (truA)
Transfer RNA biogenesis [BR:
ncg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KGD84_28005 (truA)
Prokaryotic type
KGD84_28005 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QUX26249
UniProt:
A0ABX8BYH8
LinkDB
All DBs
Position
complement(6311844..6312680)
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AA seq
278 aa
AA seq
DB search
MNEVPEPTIRIRFDVAYDGTDFSGWAVQPNRRTVQGELESALARVLRLPQVSLTCAGRTD
AGVHARGQVAQADVPAGTWEREGERVLRRLAGVLPPDVRVSAARPAPPGFDARFSPLFRR
YLYRVSDAPYGVDPLLRRDVLWHKNPLDADRMNAAAERLRGEHDFAAFCKKREGATTIRE
LLRLEWERVGPHLLHGTIQADAFCHNMVRALVGCLLAVGDGRRPVDWPARVLGAAVRDPA
VHVVGPQGLSLEEVRYPADEELAARASATRRVRELPCR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggtgccggagccgacgatccggatccggttcgacgtggcctacgacggcacg
gacttctccgggtgggcggtacagccgaaccggcgcaccgtccagggcgagctggagtcc
gccctggcccgggtgctgcgcctgccccaggtgtcgctgacctgcgccgggcgcaccgac
gccggggtgcacgcccgcggccaggtggcccaggccgacgtgcccgcggggacgtgggag
cgcgagggggagcgggtgctgcgccgactggccggcgtgctgccgcccgacgtgcgggtg
tccgctgcccgcccggccccgcccgggttcgacgcgcgcttctccccgctgttccgccgc
tacctgtaccgggtgagcgacgcgccctacggggtggacccgctgctgcgccgggacgtg
ctgtggcacaagaacccgctggacgcggaccgcatgaacgcggcggccgagcggctgcgc
ggggagcacgacttcgcggcgttctgcaagaagcgggagggcgccacgaccatccgcgag
ctgctgcgcctggagtgggagcgggtgggcccgcacctgctccacggcacgatccaggcg
gacgcgttctgccacaacatggtccgcgccctggtgggctgcctgctggcggtgggcgac
ggccgccgcccggtcgactggcccgcccgggtgctgggcgccgcggtgcgggacccggcc
gtgcacgtggtcggcccgcaggggctgagcctggaggaggtgcgctacccggccgacgag
gagctggccgcccgcgcctccgccacccgccgcgtccgcgagctgccctgccgttag
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