Nocardiopsis changdeensis: KGD84_29845
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Entry
KGD84_29845 CDS
T08932
Name
(GenBank) DNRLRE domain-containing protein
Organism
ncg
Nocardiopsis changdeensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Laminin_G_3
Endonuclea_NS_2
DUF6531
DUF4595
Laminin_G_2
DUF4314
Laminin_G_1
Motif
Other DBs
NCBI-ProteinID:
QUX22472
LinkDB
All DBs
Position
complement(6692926..6701895)
Genome browser
AA seq
2989 aa
AA seq
DB search
MPAQIPSGPEQLGGDASGRDHEVPAEHSDANGGNALDAADLQTDNDALPLAGGTTPFTPV
SPDIDPQELTDQTQEMVETTPAGEGFDPEQSQELVDERTRWTKEYENTDGTTTTLLYTDP
VHARDENGTWQEIDTTLVPKTPAAGDPATGNEGDLLGMAVEETDLTLSTDGDAPELVTLG
VTENGGHSLAFGLEEAAPVTGQAQDDTILYENVRPDADLELQAAPGMVKETIILNSADAP
REWTFPLELNGLTPELDDQGAVVFSDTDGQAQAVIPTGWMEDSSFNEETGGPAMSGDVSY
RVEEKDGDWSLVVVLDDTWLDDPDRVYPVQVDPSVADIDTNGDSYVQNDWPTTNYGGDDE
LKIGSYDGSTRAISYLRFGDVNSQLKNRYILNADLVLFNHWSANCSPRQMRVHQITESWS
ASTVTWNNRPSSSGTAVATDSFSHGESCSGAKWETVDLGKKGVDLVQDWVEGSVTNHGLS
LQADFDNTNAWKRFGSRQSANQPYLAITHSEWGASYDVGSLTEPVTGGQGGEVSVTVTNL
GSQDWEPQGWNEFRLGTRVRDKATGELLDAVAFTRLNERLTPNDSATLDARIPPLPPGEY
LLNFDMQRLQDQRWLSSESVPVTTVTVTSQDVGPRINDIYPRPGAQVGSLTPTLFAEGES
IDDWPADATVEYWFEVCADNDGEPGECVNSTWQDDRTWVVPEGTLAWGEQFLWRVRTREG
TTASPISPYYPFVTAVEQPAITSHLGGVGLSGAGRDVDPLIGNHTLTDTDAEVAAVGPAL
GIQRTYNSRDPRTDNVFGAGWSTRFDMRVSPDDDGTGNVVVTYPHGQQVRFGQNPDGTYA
PPFGSFATLTSTDGGGWRLTDKNQTGYVFDASGQVVEITDFRDRTQHLEYASDGTLASVT
NPGGRTLHFTWENGRVASVSTEPPQTDAAPLTWTYTYEGERLVQVCGPEDTDGACTRYTY
TDGSHYLTVVRDAGPVAYWRLGEAEGSTEADNDLLLDHDRHTGVYHDVQLGTGGALQGSP
ESAATFNGTSSHLRLSDWLVGQTPYLTVEMWFRTDAHGVLFSYQQQALDEAITGTATPAL
YVGTDGRLRGQFWNGTVAPITTDQAVNDGAWHHVALTAAGDRQSLYLDGAKVGGLTGAIT
QDDQRYVYAGAGSWSNWPGSEGDISHFTGDLDEIAVYNRPLGAQTVAEHHAAGTLSQKLT
QATLPSGRVHTTIEHDTAHDRVRSYTDANGATYRLSDHTLTGANGTPTGDDEEVPETEST
VTVKVTDPDDRTSSYTYDPLNGHRLISQTDVSGNTAAFAYDTGGFLAATTAPDGTVTRAG
HDERGNKISQTTCRDASDPDSCSTSYYGFHLNADDPLDPRNDQLTVERDARSTGADDDTY
ATVHTYNAFGDRIATTTPATPDFPQGRETSQTFTDGTETAVGGGTVPAGLLLTSTDPRGA
VTSREYYATGDLARVTAPNGLITEYTYDTLGREVSATVITDDHPEGITTTRNYDGDSRVT
TETGPATVNAVTETSHQASVSYTYDPDGLPLTETVTDLGDTDQVRTTTRTYDDHGRLASV
TDPEGQTETYTYDTYGNQHTRTMSGGDTFRYEYTPTGDLAEVVLTGYTGHPADPQPATDV
VLDSYAYDPVGRTAEHTDAMGRTTRYTYYDDGLPAQEIRVGFREEDGSTRDIVLADRAYD
AAGNLTRESTGNGTVTTTYTVDAANRITALVLDPDGLARRTTYTYDAGGEVLTETRTGAG
GTRTETSTYERDITGAWTSHTIENGDQDLTLTRTLDQRGLALTETTPGGATVHHTYDALG
RPVATQSPSVTIEEWSAEAVTGRPTTLVGYNAFGEATHEKDAQGQITRTSYDGAGRPVSV
TLADYTPPGSSTALTPTLTTTYNTAGHIASETDPAGGVTTYTYDQLGNIATLTEPAPRQG
EDAPVTTYTHDLLGEQLSVTDPTGARTEATYDDLGRQITLTQIERHSAPGAHTTRLAYDD
AGNLTSTTTPSGTVATATFNAAAQPVTETDPAGLTTSYTYGPTGLAAAVTHPDGTTLRTT
YDGAGRATATTAEDASGTTLATTSTRYDADSNPVAITDPLGHTTTQEYDLLGRLTTLTEP
VDDTTSITTTFGYDAASNRTRLTDGRGNTTWYTFTTHGLLESVIEPATDAHPDLADRTWT
TVYDVAGNPVEERQPGGVVQQRTFDALGRITQVSGSGAEAETQTDTFAYDLVGRPTRAGS
ATYTYDDRGNLLTAAGSSGEASFSYDIEGRMTQRTDAAGTTTFAYDDAGRVSAIGDPLTG
VEHRYAYDSAGRLGTITYGADPAPQRSFTYDAQGRLLTDTTLTLGPVPTLSTAYTYDKAG
QVTGRTTAGIAGEGEHTYTYDHAGRLTSWTAPDDTVTDYTWDAAGNRTSAGEDSAVYDER
NRLISGAGTDYSWTARGTLAETTDVDGTVTAFTHDARGRMITDGDTTYFYDGLNRLIQRG
GDKILYADQANDPVSVAGELIARDLAGSPLSTSTGGSAGLVTIADQHGDVIAGLDPATGA
ITGSRTYAPFGEVTQEDGATGSLGYQGEFTDPETGRVNMHARWYDPATGGFASRDSWTLN
PVPSVQANRYTYANGSPLNFTDPSGHWPDVIPDKYTDHIDEELRRLSQKMERYLKRQARK
AAARAAAAAGVAAGVKAAVVGGLAGLIVVLTPGTLADGTCRNLCYGNKDFPGLGYGGKGF
CRSCYGNKPTWVPNPSGGGYYYWDGNGGGFVVAAPPPPPPWKAILAAVLATAYERPTTEA
TTDSGHDQFVDDSFTRAVKDLGLNEKQLKDYFKHFPIILTDADRRREFSDLLGGWDEQPG
NCLQGNESWVYYHPLDSQGRATGVTACLSADQIDYRGRGRKKDPNKSTEIIGGDTDRGRG
SEKTNPAGWQHLDGERGFARGHLLARELGGTGRDRRNLVKMYTAANSGVMAQYEHVVRRR
LDAGERVFYVSVPNYEGNNPVPETIDLYAVGDRGFYAQWTVYNTPTGMP
NT seq
8970 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcacagatcccttcaggacccgaacagctcggcggcgacgcctctggccgcgac
cacgaggtaccagccgagcacagcgatgccaacggcggcaacgccctcgacgccgctgac
ctccaaaccgacaacgacgccctgccgctggccgggggaaccacccccttcacgccggtc
tccccggacatcgatccccaggaactcaccgaccagacccaggagatggtcgagaccacc
cctgccggtgaggggttcgacccggagcagagccaggaactggtcgacgagcgcacccgg
tggaccaaggagtacgagaacaccgacggcaccaccaccacgctcctctacaccgatccg
gtccacgcccgagacgagaacggcacctggcaggagatcgacacgaccctggtccccaag
accccggcagccggcgacccggcaacggggaacgaaggagacctcctcggcatggccgtt
gaggagaccgacctcaccctctccaccgacggtgacgccccggaactggtcacgctcggc
gtcaccgagaacggtgggcacagcctcgccttcggcctggaagaagcagctcccgtcacc
ggccaagcccaggacgacaccatcctgtacgagaacgtgcgccccgatgcggacctcgaa
ctgcaggccgcccccggcatggtcaaagagaccatcattctcaactccgcggacgctccc
cgcgagtggaccttcccccttgaactgaacggcctgaccccggaactggacgaccagggc
gcagtggtcttctccgacaccgacggccaagcccaggccgtgatccccaccgggtggatg
gaggactcctccttcaatgaggagaccggcggccccgccatgtccggtgacgtgagctac
cgggtggaggagaaggacggcgactggtccctggtcgtggtgctcgacgacacctggctg
gacgaccccgaccgtgtttaccccgtccaggtggaccccagcgtcgccgacatcgacacc
aacggtgactcctatgtccagaacgactggcccaccaccaactacggcggagacgacgag
ctcaagatcggcagttacgacggcagcacccgggcgatcagctacctgcgcttcggtgac
gtcaacagccagctgaagaaccgctacatcctcaacgccgacctggtcctgttcaaccac
tggtccgcgaactgctcgccccgccagatgagggtccaccagatcaccgagtcctggtcg
gcgtccaccgtcacctggaacaaccgcccctccagctccggtaccgcggtggccaccgac
tccttctcccacggtgagagctgcagtggcgccaagtgggagaccgtcgacctcggcaag
aagggcgtggacctggtccaggactgggttgaagggtcggtcaccaaccacggcctgtcg
ttgcaggccgacttcgacaacaccaacgcctggaagcgtttcggtagccgccagtccgcc
aaccagccctacctcgccatcacccacagcgagtggggtgcctcctacgacgtcggctca
ctgaccgaaccggtcaccggaggccagggtggcgaggtcagtgtcaccgtcaccaacctc
ggcagccaggactgggaaccccaggggtggaacgagttccgcctgggtacccgggtccgg
gataaggccaccggcgagctcttggacgcggtggcgttcacccgcctcaacgagcgcctc
acccccaatgactcggcgaccctcgacgcccgcatcccgccgctgccgccgggtgagtac
ctcctcaacttcgatatgcaaaggctccaggaccagcgctggctctccagcgaatcggtc
ccggtgaccacggtcaccgtcacctcccaggacgtggggccgcgtatcaacgacatctac
ccccgacccggggcccaggtgggcagcctcactcccaccctattcgccgagggcgagagc
atcgacgactggccggccgacgccacggtggagtactggttcgaggtctgcgccgacaac
gacggcgaaccgggtgagtgcgtcaactccacctggcaggatgaccgcacctgggtggtc
cccgagggcaccctggcctggggcgagcagttcctctggcgtgtccgcacccgcgagggc
accacagccagtccgatcagcccctattaccccttcgtcaccgcggtggagcagcccgcc
atcacctcccatctgggcggtgtcgggctcagcggcgcaggacgcgacgtcgacccgttg
atcggcaaccacaccctcaccgacaccgacgccgaggtcgcggctgtcggacccgcgctc
ggcatccagcgcacctacaacagccgtgacccgcgcaccgacaacgtcttcggcgccggc
tggagcacccgcttcgacatgcgtgtcagtcccgacgacgacggcaccggcaacgttgtg
gtcacctacccccacggccagcaggtccgcttcggccagaaccccgacggcacctacgca
ccgcccttcggtagtttcgccacgctcacctccaccgacgggggcggctggcgtctgacc
gacaagaaccagaccgggtacgtcttcgacgcctccggccaggttgtggagatcaccgac
ttccgcgaccgcacccagcacctggaatacgcctccgacggcaccctggccagcgtcacc
aaccctggcggacgcacgctccacttcacctgggagaacggccgggtcgccagcgtcagc
accgagccgccccagaccgacgccgcacctttgacgtggacctacacctacgagggtgag
cggctcgtccaggtctgcggccctgaggacaccgacggtgcctgcacgcgctacacctac
accgacggatcccactacctgacggtcgtgcgcgacgcgggccccgtcgcctactggcgc
ctgggcgaagccgaaggctccaccgaggctgacaacgacctgctgctggaccacgaccgc
cacaccggcgtctaccacgacgtccagctcgggaccggcggtgccctgcagggcagcccg
gagagcgccgcgaccttcaacggcacctcctcgcacctgcgcctgtccgactggctggtg
ggacagaccccctacctgaccgttgagatgtggttccgcaccgacgcccacggtgtgctg
ttcagctaccagcagcaggcactggacgaggccatcaccggcaccgccacacccgccctg
tacgtcggcaccgatggcaggctccgcggccagttctggaacggcacggtcgcaccgatc
accaccgaccaggccgtcaacgacggcgcctggcaccacgtcgccctcaccgcggcaggc
gaccgccagtccctgtacctggacggcgccaaggtcggcggcctcaccggtgccatcacc
caggacgaccagcgctacgtctacgccggcgccggttcctggtccaactggccgggcagc
gaaggcgacatctcccacttcaccggcgacctcgacgagatcgccgtgtacaaccgtccc
ctaggcgcccagaccgtggccgaacaccacgccgcgggcaccctctcccagaagctgacc
caggccaccctgcccagcggccgcgtgcacaccaccatcgagcacgacaccgcccacgac
cgcgtccgctcctacactgatgccaacggcgccacctaccgcctctccgaccacaccctc
accggtgcgaacggaaccccgaccggcgacgacgaggaagtgcccgagacggagagcacc
gtcaccgtcaaggtcaccgaccccgacgaccggacctccagctacacctacgaccccctc
aacggacaccgcctcatctcccagaccgacgtgtccggcaacaccgccgccttcgcctac
gacaccggcgggttcctcgccgccaccacggcaccggacggcaccgtcacccgggccggg
catgacgaacgcggcaacaagatctcccagaccacctgccgcgacgcctccgacccggac
tcctgctccacgtcctactacgggttccacctcaacgccgacgacccgctggacccgcgc
aacgaccagctgaccgtcgaacgcgacgcccgctccaccggagccgacgacgacacctac
gcgacggtccacacctacaacgccttcggcgaccgcatcgccaccacgaccccggccaca
ccggacttcccccagggccgggagacctcccagaccttcaccgacggcaccgagaccgcc
gtcggcggcggcaccgtgcccgcaggtctgctgctcacctccaccgacccccgcggggcc
gtcacctcacgggagtactacgccaccggcgacctggcccgggtgaccgcacccaacggc
ctgatcaccgagtacacctacgacaccctgggccgggaagtctccgccaccgtcatcacc
gacgaccaccccgaaggcatcaccaccacccgcaactacgacggcgattcccgggtgacc
accgaaaccggtccggccaccgtcaacgccgtcaccgaaacctcccaccaggcctcggtc
tcctacacctacgaccccgacggcctgcccctcaccgagaccgtcaccgacctgggtgac
accgaccaggtgcgcaccaccacccgcacctacgacgaccacggccgcctggcctcggtc
accgaccccgaaggccagacggagacctacacctacgacacctacggcaaccagcacacc
cgcaccatgtccggcggagacaccttccgctacgagtacacgcccaccggtgacctggcc
gaagtcgtcctcaccggctacaccggacatcctgcagaccctcagcccgccaccgacgtc
gttctggactcctacgcctacgaccccgtgggtcgcacggccgaacacaccgacgcgatg
ggccgcaccacccgctacacctactacgacgacggcctccccgcacaggagatccgcgtc
gggttccgcgaggaggacgggtccacccgcgacatcgttctagccgaccgcgcctacgat
gccgcgggcaacctgacccgggagagcaccggtaacgggaccgtcaccaccacctacacg
gtcgacgccgccaaccgcatcaccgccctggtcctggaccccgacgggctcgcccgacgc
accacctacacctacgacgccgggggagaggtcctcaccgagacccgcaccggcgccggt
ggcacacgcaccgagacctccacctacgaacgggacatcaccggagcctggaccagccac
accatcgagaacggcgaccaggacctcaccctcacccgaaccctggaccagcggggcctg
gcactgaccgagaccacccccggcggtgcgaccgtccaccacacctacgacgccctcggc
cgaccggtcgccacccagagcccctcggtgaccattgaggaatggtccgccgaagccgtc
accggccgccccaccaccctcgtgggctacaacgccttcggtgaggccacccacgagaag
gacgcccagggacagatcacccgcacctcctacgacggtgcggggcgccctgtgtcggtc
acgctcgcggactacaccccgcccggctcctccaccgccctgaccccgaccctcaccacc
acctacaacaccgccgggcacatcgcctccgagaccgacccggccggcggcgtcaccacc
tacacctacgaccagctcggcaacatcgccaccctcaccgaacccgcaccccgccagggc
gaagacgccccggtcaccacctacacccacgacctactgggcgagcagctctccgtcacc
gacccgaccggcgcccgcaccgaggccacctacgacgacctgggccgccagatcaccctg
acgcagatcgagcgccactccgcccccggcgcccacaccacccgcctcgcctacgacgac
gcgggcaacctcacctcgaccaccacaccctccggcacggtcgccaccgccaccttcaac
gccgcagcacaaccggtcacggagaccgaccccgccggactgaccacctcctacacctac
gggccaacagggctggccgccgcggtcacccaccccgacggcaccacgctgcgcaccacc
tacgacggtgcgggacgcgccaccgccaccacggccgaggacgcctccggcaccaccctg
gccaccaccagcacccgttacgacgccgactccaaccccgtcgccatcaccgaccccctg
ggccacaccaccacccaggaatacgaccttctcggaagactgaccacccttaccgagccc
gtcgacgacaccacctccatcaccaccacgttcggctacgacgccgcgagcaaccgcacc
cgcctcactgacggacgcggcaacaccacctggtacaccttcactacccacgggctcctg
gaatcggtgatcgaaccggccaccgacgcccaccccgacctggccgaccgcacctggacc
accgtctacgacgtcgcgggcaacccggtggaggaacgccagcccggcggggtcgtccag
cagcgaaccttcgacgccctgggccgcatcacccaggtcagcggcagcggagccgaggcc
gagacccagaccgacaccttcgcctacgacctggtcggccgcccgacccgggccggatcg
gccacctacacctacgacgaccgcggcaacctgctcaccgcagccggcagctcaggggag
gcgtccttctcctacgacatcgaagggcggatgacccagcgcaccgacgcggccggaacc
accaccttcgcctacgacgacgcgggacgggtgagcgccatcggagacccgctcaccgga
gtggagcaccgctacgcctatgacagtgcgggacgcctgggcaccatcacctacggagcc
gacccggccccgcagcgctcgttcacctacgacgcccaggggcgcctgctcaccgacacc
accctcaccctgggcccggtgccgaccctgtccaccgcctacacctacgacaaggccgga
caggtcaccggcaggaccaccgccggtatcgccggggagggcgagcacacctacacctat
gaccatgccgggcgtctgaccagttggaccgcacccgacgatacggtcaccgactacacc
tgggacgccgcgggcaaccgcacctccgctggtgaggacagcgccgtctacgacgagcgc
aaccgcttgatcagcggggccgggaccgattactcctggaccgcccgtggcactttggcc
gaaaccacggacgtcgacggaaccgtcacggccttcacgcacgacgcccgtggccggatg
atcaccgatggggacaccacctacttctacgacggcctgaaccggctcattcagcgcggc
ggcgacaagatcctctacgcggaccaggccaacgacccggtctccgtggcaggggagctc
atcgcccgggacctggccggatcaccgttgtccaccagcaccggtggcagtgctgggctg
gtcaccatagccgaccagcacggcgatgtcatcgcagggcttgaccccgctaccggagcg
atcaccgggtcgcgcacctacgcgccgttcggcgaggtcacccaggaggacggggccacc
ggttcactcggctaccagggcgagttcaccgacccggagaccgggcgggtgaacatgcac
gcccgctggtacgacccggcgacgggcgggttcgcctcccgggacagctggaccctcaac
ccggtcccgtcggtacaagcgaaccggtacacctacgccaacggttccccgctgaacttc
accgaccccagtgggcattggcctgacgttatcccggataagtacaccgatcacattgac
gaagagcttcgtcggctttctcagaaaatggagaggtatctcaaaaggcaggcgaggaaa
gccgcagcaagagccgcagccgcagccggagttgctgccggagtgaaggcagccgttgtt
ggtggccttgctggtcttatcgtggttctcacgcctggaactttggcagatggcacctgt
cgcaatctctgctacgggaataaggatttccctggcctgggttacggtggcaagggtttc
tgccgttcctgctatgggaataagcccacgtgggtcccaaacccttctggaggcggctac
tactactgggatggcaatggaggcggtttcgttgttgcggctcctccgcccccgcccccg
tggaaggcaatccttgcagcggtcctggccactgcgtacgaacggcccactactgaggca
accacagactcgggccacgaccaatttgttgacgactcattcactcgtgccgtaaaggat
ctggggctaaatgaaaagcaactgaaggactactttaaacacttcccaattattctcact
gatgcggatcgtcgtcgagaatttagcgatctcttgggggggtgggatgagcagcccgga
aactgccttcagggcaatgaatcatgggtctattatcaccccctcgactctcaggggaga
gccactggcgtcacggcatgcttgagtgctgaccaaatcgactacaggggtcgcggcagg
aaaaaggacccaaataagtcgacggagatcattggtggagacactgatcgcggtaggggt
agcgaaaaaaccaatccggccggatggcagcatctcgacggagaaagaggatttgctcga
ggtcaccttctcgctcgtgaacttggtggtacaggcagagacaggcgtaaccttgtaaag
atgtatactgcggctaactcgggcgtgatggcgcagtatgagcatgtagtgaggaggcgg
ctcgatgcaggggagcgcgtattttacgtttctgtccctaactatgaaggaaacaacccc
gttccggagaccatcgacctgtatgctgtgggcgatcggggtttctatgctcaatggact
gtgtacaacacccctacgggaatgccttaa
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