Nocardiopsis changdeensis: KGD84_29905
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Entry
KGD84_29905 CDS
T08932
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_29905
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KGD84_29905
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
DUF2199
Motif
Other DBs
NCBI-ProteinID:
QUX26282
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Position
6714668..6715321
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AA seq
217 aa
AA seq
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MVALGDGRFARASVALKLYKRTRRIRAVLRWSDAGKSPEIYLGEVSHSTRLANLREAWQR
AWEKGLLTEESLPPSSKASSREVRAVMLANRGRDTKPEMALRSLLHAKGLRYRVDASPLK
GVRRRADVIFPKDKVAIFVDGCFWHGCSQHLRPAKKNAEAWAAKIEGNKVRDADTNELLR
AAGWTVIRFWEHEDSKRAADTVEQVLRRLRGKGEISN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtggccttgggggacggccggttcgcgcgggcttcggtcgcactcaagctttataag
agaaccagaaggatccgcgccgttcttcgatggtctgacgctggcaagtctccggagata
tacctcggtgaggtatcgcacagcacacgcttggcgaacctgcgtgaggcgtggcaacgt
gcttgggaaaaaggacttctcactgaggagtccttgccaccctcatccaaagcctcctct
cgagaagtccgtgcggtcatgctcgcgaatcgaggaagagataccaaacccgaaatggcc
ctacgttccttgcttcacgcgaagggtctacgttacagggtggacgcgagtccactgaaa
ggggttcgtcggcgcgcagacgtcatttttcccaaggataaggttgccatattcgtcgat
ggctgtttctggcatggatgctcgcagcatctgcgtccagcgaagaagaacgcagaagcc
tgggccgcgaagatcgaaggcaataaagtccgtgatgcggatactaatgaactactacgc
gcggctggttggacggtcattcggttctgggagcacgaggactcaaagagagctgcggat
accgtggaacaggttttgcggcgattgcgcggtaaaggcgagatcagcaactga
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