Nocardiopsis changdeensis: KGD84_31420
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Entry
KGD84_31420 CDS
T08932
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03030
DNA replication
ncg03430
Mismatch repair
ncg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGD84_31420
03430 Mismatch repair
KGD84_31420
03440 Homologous recombination
KGD84_31420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncg03032
]
KGD84_31420
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_31420
Enzymes [BR:
ncg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGD84_31420
DNA replication proteins [BR:
ncg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGD84_31420
DNA repair and recombination proteins [BR:
ncg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGD84_31420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_14
AAA_16
Rad17
AAA_18
DnaX_C
AAA_19
Mg_chelatase
nSTAND3
AAA_28
TsaE
T2SSE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QUX22738
LinkDB
All DBs
Position
complement(7047339..7049534)
Genome browser
AA seq
731 aa
AA seq
DB search
MSIALYRKYRPATFAEVRGQEHVTEPLRQALRSGRINHAYLFSGPRGCGKTTSARILARS
LNCAQGPTPDPCGECDSCVALAPDGGGSIDVIEIDAASHGGVDDARDLRERAFFAPVSSR
YKVYIIDEAHMVTREGFNALLKLVEEPPPHLKFVFATTEPEKVIGTIRSRTHHYPFRLIP
PSTLRELMEDLLEQEKVAYDPAALPLVVRAGAGSARDTLSVLDQLIAGSDDQGITREGAV
SLLGYTDSSLLGEMVDALGARDGAAVFSLIDRMVEGGHDPRRFATDLLERFRDLVVLAAV
PDALDKGLVNVAAEAADQMKAQATRLGPAELTRGADILNQGLTEMRGATAPRLVLELMCS
RILLPSADGDQGALLARLEQMERRIAAGPVAPAPAAPAASAAPVQAPQPAPAPAAPPAPA
QSRQPQPQPAPQEQSQPPQAQQPQQPQPRAAEPDGWDAAPARREPAPAAPAPAASAPAPQ
GRAVDLGRIQASWPQILDAVKRLRRFTWMVLTGSDVRPVGVEGNAVVLGFSRPNEARGFG
NSGSDQVVASAVQQVLGMEVRVTAVSGGGAPAPAPAPARPAEPAGWDAPAPAAPAPAPER
PARPQEVREQPAQPQPAPQERPAPQAPEGPPPDRIVTGLQEPPPDPYEDAAAAPPPEDFG
PEPAAPAARPAAPAPKPEPARGAEAPAAPAPERAPAADAGLPPGVGAALIETHLGGRVIE
EIEHEAPDASL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgcgctgtaccgcaagtaccgtcccgcgacgttcgccgaggtgcgcggacag
gagcacgtgaccgaaccgctgcgccaggcgctgcgcagcggccggatcaaccacgcgtac
ctgttcagcggcccccggggctgcggcaagaccaccagcgcgcgcatcctggcccgctcc
ctcaactgcgcccagggccccacccccgacccgtgcggagagtgcgactcctgtgtggcg
ctggcccccgacggcggcggcagcatcgacgtcatcgagatcgacgcggcctcccacggc
ggtgtggacgacgcccgcgacctgcgcgaacgcgcgttcttcgcgccggtcagctcgcgc
tacaaggtgtacatcatcgacgaggcgcacatggtgacccgcgagggcttcaacgcgctg
ctgaaactggtggaggagcccccgccgcacctgaagttcgtgttcgcgaccaccgagccg
gagaaggtcatcggcaccatccggtcgcgcacccaccactacccgttccggctgatcccg
ccgagcaccctccgggagctcatggaggacctgctggagcaggagaaggtggcctacgac
ccggcggcgctgccgctggtggtgcgggcgggcgcgggttcggcccgcgacaccctgtcg
gtgctggaccagctcatcgcgggctcggacgaccagggcatcacccgtgagggcgcggtg
tccctgctggggtacaccgactccagcctgctgggcgagatggtggacgcgctgggcgcg
cgcgacggcgccgcggtgttctccctgatcgaccggatggtggagggcggccacgacccc
cggcggttcgccacggacctgctggagcggttccgcgacctggtggtgctggccgcggtc
ccggacgccctggacaagggcctggtgaacgtggccgccgaggccgccgaccagatgaag
gcccaggcgacccggctgggcccggccgagctgacccgcggcgcggacatcctcaaccag
ggcctgacggagatgcgcggtgcgacggcgccccggctggtgctggagctgatgtgctcg
cgcatcctgctgccgtcggccgacggcgaccagggcgcgctgctggcccggctggagcag
atggagcggcggatcgccgcgggtccggtggcacccgccccggccgcccccgccgcgtcg
gcggcgcccgtccaggcaccgcagcccgccccggcccccgccgcgcccccggccccggca
cagtcccggcagccgcagccgcagcccgcgccgcaggagcagagccagccgccgcaggca
cagcagccgcagcagccgcagcccagggccgccgagcccgacggctgggacgccgcaccg
gcccggcgcgaacccgccccggcggcgcccgcgcccgccgcgtccgctcccgcgccccag
ggcagggcggtggacctgggccggatccaggcctcctggccgcagatcctggacgcggtc
aagcgcctgcgccgcttcacctggatggtgctgaccggcagcgacgtgcgtccggtcgga
gtggagggcaacgccgtcgtcctcggcttctcccggcccaacgaggcccggggcttcggc
aacagcggcagcgaccaggtggtggcctcggccgtccagcaggtgctgggcatggaggtg
cgggtgaccgccgtctccgggggcggcgcccctgcccccgcgcccgctcccgcccggccg
gccgagcccgcggggtgggacgcccccgccccggcggccccggctccggccccggagcgc
ccggcccgcccccaggaggtccgggagcagcccgcgcagccgcagcccgcgccccaggag
cggccggcgccgcaggccccggagggaccgccgccggacaggatcgtcaccggcctccag
gagccgccgcccgacccctacgaggacgccgcggcggccccgcctccggaggacttcggg
cccgagccggccgcccccgccgcgcgcccggccgcaccggcgccgaagccggagcctgcc
cggggcgccgaggcgcccgcggccccggcgcccgagcgggcacccgccgccgacgccggg
ctccccccgggagtgggcgccgccctcatcgagacgcacctgggcggcagggtcatcgag
gagatcgagcacgaggccccggacgcctccctgtga
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