Neoasaia chiangmaiensis: A0U93_02215
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Entry
A0U93_02215 CDS
T04705
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nch
Neoasaia chiangmaiensis
Pathway
nch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U93_02215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nch03019
]
A0U93_02215
03400 DNA repair and recombination proteins [BR:
nch03400
]
A0U93_02215
Enzymes [BR:
nch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0U93_02215
Messenger RNA biogenesis [BR:
nch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0U93_02215
DNA repair and recombination proteins [BR:
nch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0U93_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AQS86954
UniProt:
A0A1U9KMD1
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All DBs
Position
463400..465247
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AA seq
615 aa
AA seq
DB search
MEFVRNDFATPSPATEDRSPEAVLRRVFGFTAFRGLQADAVDTVMRGEDALVLMPTGGGK
SLCYQVPALCRDGMGLVVSPLIALMDDQVAALRQLGVNAAALHSELEDDDLARIRSDIAS
SKLDILYISPERLLSPGTIAYLAKRRLSVIAIDEAHCISAWGHEFRPEYRGLAALPGVFP
NVPRIALTATADQRTRDDILDALDMRHARQFIASFHRSNLFVSVRPKTQETRQLEDMLQS
RKDAASIVYCGSRNKTERVARSLNERGFRALPFHAGLSPQEKRATLTRFRSGEPIVIVAT
IAFGMGIDRPDVRCVVHLDMPASPEAYYQQIGRAGRDGQRADTLLLYGGEDIARARHWLE
LSNAPDREKREMHARLESMIALTESVSCRTQALLSCFGETLSVACGHCDNCKTPVSTFDG
TEAAQKVLSAIYRTNQRFGAVHLAAVLRGKKTDAVTRHAHQHLSVFGVGREQSETWWRGV
IRQLIARGAIRINGEHGALGLVTDIARPILRGEERILLRNDPTASLREVVSRNNAAENLS
EEAARRFDSLRAWRLGEAREQEIPPYVIFHDSVLREIAIDRPADLETLARLKGVGGSKLE
RYGVAVLAALEKAER
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
ttggagtttgtcagaaacgactttgccaccccctctccggcgaccgaggacaggtcgccg
gaggctgtcctgcggcgcgtttttggcttcacggcatttcgtggtctgcaggcggatgct
gtcgataccgttatgcgcggcgaggacgcacttgttctcatgccgacaggcggcggcaag
agcctttgctatcaggttcctgccttgtgccgggacggcatgggactggtggtgtcaccc
ctgatcgccctgatggacgatcaggtcgcagctctgcgacagcttggcgtcaacgcggcg
gctctccattctgaactggaagatgacgatctcgcgcggatccgcagcgacatcgccagt
tcaaaactcgatatactctacatctcgcccgaaagacttctgtcacccggcacgatcgca
tatctggccaaaaggcgcctttcggtcatcgcgatcgacgaggcgcattgcatttcggcc
tggggccacgagtttcgtccggaatatcgcgggctggcagcattgcccggcgttttcccg
aacgtgccgcgtattgcgctgaccgcgacggccgatcagagaacacgcgacgatattctc
gacgccctggacatgcggcatgcgcggcagtttatcgccagcttccatcgctcaaacctg
tttgtgtccgtccgccccaagacgcaggaaacgcggcagctggaagatatgctgcagagc
cgtaaggacgcagcctccattgtatactgtggcagccgcaacaagacggagcgcgtcgca
cgaagtctgaatgagcgcggctttcgggcgctgccatttcatgccggactgtcacctcag
gagaagcgtgcaacgttgacgcgtttccgcagcggcgaacccattgtcatcgttgccacg
atcgcgttcggcatgggaatcgaccgtcccgatgtgcgttgcgtcgtgcatctcgacatg
ccagcgtcgccggaggcctattatcagcagatcggccgggcagggcgagacgggcagcgc
gccgatacgttgcttctttatggtggcgaagacatcgcacgtgcgcggcactggctcgaa
ttatcgaacgcgccggatcgtgagaagcgcgagatgcacgcacgtctcgaaagcatgatc
gccttgacggagagtgtgtcatgccggacgcaggccctgctctcatgcttcggtgaaacc
ctgtcggtcgcgtgcggtcactgtgacaattgcaaaacgcccgtttcgaccttcgatgga
accgaagcggctcagaaagttctctcggcgatctatcgaaccaatcagcgatttggtgcc
gtccacctggccgccgtcctgcgtggcaagaagacagacgcagtaacacgtcacgcccat
cagcacctctccgttttcggcgttggccgtgagcagagcgaaacatggtggcgcggcgtc
atccgccagctgatcgctcgcggcgccatccgcattaatggagagcatggcgctctcggc
ctcgtaactgatattgctcgccccattcttcgcggcgaggagcgtatcctgcttcgcaat
gatcctacggccagccttcgagaggttgtcagccgcaataatgctgccgaaaacctctct
gaagaagccgcgagacgtttcgactctcttcgggcatggcgcctcggtgaggcgagggag
caggagattccgccctatgtcattttccacgactcagtcctgcgggagatcgccatcgac
agacctgcggaccttgaaacactggcaagactgaaaggggtaggcgggtccaaacttgaa
cgctacggcgtcgctgtgctggcagcgctcgaaaaagccgaacgttga
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