Neoasaia chiangmaiensis: A0U93_02945
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Entry
A0U93_02945 CDS
T04705
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nch
Neoasaia chiangmaiensis
Pathway
nch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U93_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nch03019
]
A0U93_02945
Messenger RNA biogenesis [BR:
nch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A0U93_02945
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
RNase_J_C
Lactamase_B
Anti-Pycsar_Apyc1
Xan_ur_permease
Motif
Other DBs
NCBI-ProteinID:
AQS87069
UniProt:
A0A1U9KMQ8
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Position
complement(614360..616006)
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AA seq
548 aa
AA seq
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MNDMTGGLSFLPLGGTGEIGMNLNLYRLDGTWLAVDCGIGFSGNDTPEAEVLMPDPGFIA
ERSKSLCGLVITHAHEDHLGAVAHLWPQLRCPIYATPFAAAVLRRKLGEAHLLNQVKIHT
VRGNEAFTVGPFDLQFVSVTHSVPEAKALILRTPQGIIVHTGDWKLDQEPVVGPVTDLEA
FKAIGDEGVLAMVSDSTNALKDGVSGTEGSVRDSMAELIASLHGRIAITCFASNVARVDS
IARAARKAGREVMIVGRSLRNLETAARECGYFADLPPFLTEQDANSVADDNLLMIITGSQ
GEPRSALSRIASDTHPNITLGEGDTVIYSSRMIPGNEQAVMAVQDNLTRRGVTVLTDKDH
LVHVSGHATRDDMRTLYELVRPQYSVPVHGEWRHLTAHAALARDLGINAVLLEDGDVLNL
GPGSVEVIDTAPTGRLALDGGRLLPMTGGVLAARRKMLFNGIVLASFAVDDEGYVIGEPK
ISAPGLLESEDPESIRITQEFADAIDEIPDELRQDDNAFRDAAKTALRRALGRKLQKRPL
VDVHLLRV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatgacaggcggcttgtcctttctgcctttgggcggaacaggcgagatcggc
atgaatctcaatctctaccgcctcgacggcacgtggcttgcggtcgattgcggtatcggc
ttctccggcaacgatacgccggaggcggaggtcctgatgccggacccgggctttatcgca
gaacgctcgaaatcgctgtgcgggcttgttatcacgcacgcacatgaagaccatctcggc
gctgtggcgcatctatggccgcaactccgctgtccgatttatgcgacgcctttcgccgcg
gcggttctgcgccgaaagctcggcgaggcgcatctgctcaatcaggtcaagatccacacc
gtgcgcgggaacgaggcgtttacggtcggtccgttcgatctgcagttcgtctcggtgacg
cactctgtgccggaagcaaaggcgctgatcctgcgcacgccgcaaggcattatcgtgcat
accggcgactggaagctggatcaggagccggtcgtaggccctgttaccgacctggaggca
ttcaaggccatcggcgatgaaggcgtgctcgccatggtgtccgacagcaccaacgcgctc
aaggatggcgtatcgggcacggaaggttcggtgcgtgacagcatggcggaactgattgcc
agccttcacggtcgcatcgcgatcacctgctttgccagcaacgtggcgcgcgtcgactcc
attgcccgagccgcacggaaggcgggccgtgaggtcatgattgtcgggcgttcactgcgc
aatctcgagacagcggcacgcgagtgcggctacttcgccgatctgccgccgttcctgacg
gagcaggatgccaattcggtggcggatgacaacctgctgatgattatcaccggcagtcag
ggtgagccccgttcggcgctgtcgcgtattgcttccgatacccatcccaacattacgttg
ggcgagggcgataccgtcatctacagctcacggatgattcctggaaacgagcaggcggtc
atggcggtgcaggataatctgacacgtcgcggcgtgacggtcctgaccgataaggaccat
ctcgtccatgtatccgggcatgcgacgcgtgacgacatgcgtacgctttacgaactggtc
cgccctcaatacagcgtgccggtccacggcgagtggcgtcatctgactgcccatgccgca
ttggcgcgcgatctgggcatcaacgccgtattgctggaagatggtgacgttctcaatctc
ggtccgggctcggtggaggtgatcgacacggcaccgacgggccggctcgcactggatggt
gggcgtctgctgccgatgacaggcggtgttctggcggcacgtcgcaaaatgctgttcaac
ggcatcgtgctggcgagctttgctgtggatgacgaaggttatgtcattggcgagcccaag
atcagcgcgccggggttgctggaatccgaagatccggagagcatccgcatcacccaggaa
tttgccgatgcgatcgatgaaattcccgatgaactgcgccaggacgacaatgcattccgt
gacgcggccaagacggcccttcgccgtgcgctgggccgcaagttgcagaagcgcccgctc
gtggatgtccatctgctacgtgtctga
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