Neoasaia chiangmaiensis: A0U93_08620
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Entry
A0U93_08620 CDS
T04705
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nch
Neoasaia chiangmaiensis
Pathway
nch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U93_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nch03021
]
A0U93_08620
03019 Messenger RNA biogenesis [BR:
nch03019
]
A0U93_08620
Transcription machinery [BR:
nch03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A0U93_08620
Messenger RNA biogenesis [BR:
nch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0U93_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
NACHT
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AQS87996
UniProt:
A0A1U9KQD2
LinkDB
All DBs
Position
complement(1843867..1845156)
Genome browser
AA seq
429 aa
AA seq
DB search
MHLADLKAKSPSDLLAYAESLEIENASSMRKQDIMFAILKTLADNDQAIYGEGTLEILPD
GFGFLRSPEANYLPGPDDIYISPTQVRRFGLRPGDTVEGQIRAPRDGERYFSLLKVNTIN
FEAPESVRQRINFDNLTPLYPERRLKMEVEPTGPVEAPAKGKKDQRDYTPRVIDLVTPIG
MGQRALIVAPPRTGKTVMLQSIASSISANHPDVFLIVLLIDERPEEVTDMARSVRGEVVS
STFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGV
DANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKL
ADKRTFPAIDITKSGTRKEELLVDRGTLSKMWVLRRILAPMGTMDAMDFLLDKLKYSKSN
QDFFDAMNN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgccgacctcaaggcaaaatccccctccgatctgctcgcttacgcggaaagc
ctggagatcgagaacgcatcgtccatgcgcaagcaggacatcatgttcgccatcctcaag
accctggccgataacgaccaggcgatctacggcgaaggcacgctggaaatcctgcccgac
gggttcggcttcctccgctccccggaagccaactatctccccggcccggacgatatctac
atctcgccgacccaggtgcgccgcttcggcctgcgccccggcgacacggtggaaggccag
attcgcgccccgcgcgacggcgagcgttatttctcgctgctcaaggtcaacaccatcaac
ttcgaggcgccggaatccgtccgccagcgcatcaacttcgataacctgacgccgctctac
cccgagcgccgcctgaagatggaagtcgagccgaccggcccggtcgaggccccggcgaag
ggcaagaaggaccagcgcgactacacgccgcgcgtcatcgatctcgtcacgccgatcggc
atgggccagcgcgcactgatcgtcgctccgccgcgcaccggcaagaccgtgatgctgcaa
agcatcgcctcctcgatttccgccaaccatccggatgtcttcctgatcgtcctgctgatc
gacgagcgaccggaagaagtgaccgacatggcccgctccgtgcgcggcgaagtcgtctcc
tccaccttcgacgaacccgccacccgccacgtgcaggtcacggaaatggtgctggaaaag
gccaagcgtctggtcgagcacaagcgcgacgtcgtcatcctgctggattcgatcacgcgt
ctggcccgcgcctacaacaccgtcgtgccctcgtcgggcaaggtgctgaccggcggtgtg
gacgccaacgccctgcagcgcccgaagcgcttcttcggcgcggcgcgcaacatcgaggaa
ggcggctcgctgaccatcatcgcgaccgcgctgatcgataccggctcgcgcatggacgaa
gtcattttcgaagagttcaagggcaccggcaattccgagctcattctcgatcgcaagctg
gccgacaagcgcaccttcccggccatcgacatcaccaagtcgggcacgcgtaaggaagag
ctgctggtcgatcgcggcacgctgtcgaagatgtgggtgctgcgccgtatcctcgcgccg
atgggcacgatggacgcaatggacttcctgctcgacaagctcaaatacagcaagtcgaac
caggacttcttcgatgcgatgaacaactga
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