Neisseria canis: NCTC10296_01528
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Entry
NCTC10296_01528 CDS
T06799
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nci
Neisseria canis
Pathway
nci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10296_01528 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nci03019
]
NCTC10296_01528 (pnp)
03016 Transfer RNA biogenesis [BR:
nci03016
]
NCTC10296_01528 (pnp)
Enzymes [BR:
nci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC10296_01528 (pnp)
Messenger RNA biogenesis [BR:
nci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10296_01528 (pnp)
Transfer RNA biogenesis [BR:
nci03016
]
Prokaryotic type
tRNA degradation factors
NCTC10296_01528 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
DUF5813
DUF6033
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
VEF01922
UniProt:
A0A448D914
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All DBs
Position
1:1619782..1621911
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AA seq
709 aa
AA seq
DB search
MFNKHVKSFQYGNQTVTLETGEVARQAAAAVKVSMGDTVVLVAVTTNKDVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSI
DPEIDSDIPAMIGASAALVLSGVPFAGPIGAARVGYAGGQYLLNPTKTELETSQMDLVVA
GTAKAVLMVESEAQVLPEDVMLGAVVYGHEQMQVVIDAINEFADEVNPEVWDWKAPETDT
ELVAKIRGIAGGTIGEAFKIRQKQARTAKLDEAWSAVKESLITEETDTLTANQIKGIFKQ
LEADVVRGQILDGQPRIDGRDTRTVRPINIQTGVLPRTHGSALFTRGETQALAVATLGTS
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRMGAPKRREIGHGRLAKRALVAVLPEPE
EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILENNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALEQAKEARLHILAQMKE
AVDGPQELSQHAPRLFTMKINPDKIRDVIGKGGETIRAITAETGTEINIDDDGTVTIAAV
AGEAGEAAKRRIEEITAEVEVGKVYEGTVLKILENNVGAIVSVMPGKDGLVHVSQIAHER
VNNVADYLKVGQTVNVKALEVDDRGRVRLSIKALLEAPAREPREQQPKD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagcatgttaaatcgtttcaatacggtaaccaaaccgttactttggaaacc
ggcgaagtagcgcgccaggccgccgccgcagtaaaagtgtctatgggcgatactgtggtg
ctggtagcggtaacaaccaataaagacgttaaagaaggtcaagacttctttccgctgacc
gtcgattatttagagcgcacttatgctgccggcaaaattccgggcggttttttcaaacgc
gaaggcaagcaaagcgagaaagaaattctcaccagccgcttgatcgaccgcccgatccgc
ccgctgttcccggaaggcttttaccacgacatccaaatcgtagcgatggtggtgtctatc
gaccctgaaatcgattccgacattcccgccatgatcggcgcgtctgctgcgctggtgttg
agcggcgtaccgtttgccggcccgattggcgcggcgcgagtgggctatgccggcggccaa
tatctgctgaacccgaccaaaaccgagctggaaacttcccaaatggatttggtggtggcc
ggtacggccaaagccgttttgatggtggaatcagaagcgcaagtactgcctgaagacgtg
atgttgggcgcagtggtttacggccatgagcaaatgcaggtggtgattgatgccatcaac
gaatttgccgatgaagtgaaccccgaagtgtgggattggaaagcgccggaaaccgatacc
gagctggttgccaaaatccgcggtattgccggcggcaccatcggcgaggccttcaaaatc
cgtcaaaaacaagcgcgcacggcgaagctggacgaagcgtggagcgcggtaaaagagtct
ttgattaccgaagaaaccgacacgctcaccgccaaccaaatcaaaggcattttcaaacaa
ttggaagccgatgtggtgcgcggccagattttggacggccaaccgcgtatcgacggccgc
gacacccgcaccgtgcgcccgattaatattcagacaggcgtattgccgcgcacgcacggt
tccgccctgtttacccgcggcgaaacccaagcgcttgccgtggccactttaggcacctcg
cgcgacgagcaaatcatcgacgctttgagcggcgaatacaccgaccgctttatgctgcac
tacaacttcccgccatactctaccggcgaagtgggtcgcatgggcgcacctaaacgccgc
gaaatcggccatggccgcttggctaagcgcgctttggttgccgtgttgcctgagcctgaa
gagttcagctacaccatgcgcgtggtatcggagattaccgaatccaacggttcgtcttcc
atggcttccgtgtgcggcggctgtttgagcctgctgtctgccggcgtgccgctgaaagca
cacgttgccggcatcgccatgggcttgattttggaaaataataaattcgccgtattgacc
gatattctgggcgacgaagaccacttgggcgatatggacttcaaagtggccggtaccacc
gagggcgtaaccgcgctgcaaatggacattaagattcaaggcattaccaaagaaatcatg
cagattgccttagagcaggccaaagaagcgcgtctgcacatcttggcgcaaatgaaagaa
gccgtagacggcccgcaagagctgtcgcaacacgcgccgcgcctgttcaccatgaaaatc
aaccccgataaaatccgcgatgttatcggcaaaggcggcgaaaccatccgcgccatcacg
gccgaaaccggcaccgaaatcaatatcgacgacgacggcaccgtaaccatcgcagcagtt
gcaggcgaagcgggcgaagccgccaagcgccgcatcgaagaaattactgcggaagtggaa
gtgggcaaagtgtatgaaggcaccgtgttgaaaattttggaaaacaacgtcggcgccatc
gtatccgtaatgccgggcaaagacggcttggtgcatgtgagccaaatcgcacacgagcgc
gtgaacaatgtggccgattatctgaaagtgggccaaaccgtgaatgtgaaagcgctggaa
gtggacgaccgcggccgcgtacgcttgtcgatcaaagcgttattggaagcacctgcccgc
gaaccgcgcgagcagcaaccgaaagactaa
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