Neomoorella carbonis: MCACP_02760
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Entry
MCACP_02760 CDS
T11049
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ncj Neomoorella carbonis
Pathway
ncj02020
Two-component system
ncj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ncj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MCACP_02760 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCACP_02760 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncj03021
]
MCACP_02760 (rpoN)
Transcription machinery [BR:
ncj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCACP_02760 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_23
HTH_Tnp_ISL3
HTH_17
HTH_IclR
MarR_2
Sigma70_r4
HTH_Crp_2
Sigma70_r4_2
HTH_3
HTH_Tnp_4
HTH_21
Motif
Other DBs
NCBI-ProteinID:
WXJ93816
LinkDB
All DBs
Position
263956..265341
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AA seq
461 aa
AA seq
DB search
MRERLGLNLEQTQKLIMTPELRQAIVVLQLSTLELAEYVQQELQENPLLELRDEEEVAAT
DELIDDPESFEIDWQEYFQDGSDLGYVSVPREERPEWNYQNLLTGQPTLQDHLLLQLKIA
ATSTSELEIGTFLIGNLDANGYLKISLKEAAACLKVSPAAVWRVLQLIQRFDPPGVGARN
LTECLLLQLRQRKDAPPAAEKIIRYFLTDVAGGRLKRIARRLNLSLPEVQAVVDYIRTLD
PKPGRSFGGGQENRYIVPDVIIERVGGDYVVLVNDLAMPRLGINPFYQALMRHDGSCDQA
TRRFIESKLNAAAWLIRSLEQRRLTLYRVVNCLVQEQREFLDKGLKYLKPLTMRQVAASL
GIHESTVSRATANKYVQTPWGVFELKFFFASGVAKKGGAAAAESIKKIIAEAISKEDATN
PLTDLQLQELLLQQGIKISRRTVAKYRDEQGIPPAAKRKRY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgaacgcctgggacttaacctggaacagacgcaaaagctaatcatgacaccggaa
ctgcgccaggccattgttgtcctgcagctctccaccctggagctggctgaatacgtccag
caggaactacaggaaaacccgttactggaattaagggatgaagaagaagttgctgcaacc
gatgaattgatagatgacccggaatcctttgagattgactggcaggaatatttccaggac
ggcagcgacctgggttatgtcagcgttccccgggaggaacgtccggaatggaattaccag
aacctcctgaccggccagcctaccctgcaggatcatcttctgctccagttaaaaatagcg
gccacctcaaccagcgagctggagattggcacctttctgatcggcaatttggacgctaac
ggttatctgaagattagcctcaaggaagcagcggcctgtttaaaggtttcccctgcggcc
gtctggcgggtactgcagttaatccagcgttttgacccaccgggggtaggagccaggaat
cttacggagtgtctcctgctccagctgcgccagcggaaagacgctccgccggcagcagaa
aaaattatccggtattttttaaccgatgtcgccggaggacggctgaagcggattgcccgg
cgcctgaacttgagtctcccggaagtccaggcggtggtagattatatccgtaccctggac
cccaagcccggccgctcctttggcggcggccaggagaaccgctatattgtacccgatgta
atcattgagcgggtcggcggggattacgtggtcctggtcaatgacctggccatgccgcgg
ctgggcatcaaccctttttaccaggccttaatgcgtcatgatggaagctgcgaccaggca
acccggcgttttatagaaagcaagctcaatgccgcggcctggcttattcgcagcctggaa
cagcgccggctgaccctttaccgggtggtcaactgcctggtacaggagcagcgggaattc
ctggataaaggtttaaaatacctgaaacctctgaccatgcgccaggtagccgcctcctta
ggcatccatgaatcgaccgtcagccgggcgacggccaataagtatgtccagacgccatgg
ggagtctttgaattaaaatttttctttgccagtggtgtagcaaaaaaaggcggcgctgcc
gccgccgaaagtatcaaaaaaataatcgctgaagctatcagcaaggaggatgccaccaac
ccccttacggacttgcaactgcaggaactgctcctgcagcaggggatcaaaatttcccgg
cggacggtagccaagtaccgcgacgagcagggtatccccccagcagccaaaagaaaacgt
tattaa
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