Neomoorella carbonis: MCACP_02900
Help
Entry
MCACP_02900 CDS
T11049
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
ncj Neomoorella carbonis
Pathway
ncj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCACP_02900 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncj03019
]
MCACP_02900 (rnr)
03016 Transfer RNA biogenesis [BR:
ncj03016
]
MCACP_02900 (rnr)
Enzymes [BR:
ncj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MCACP_02900 (rnr)
Messenger RNA biogenesis [BR:
ncj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCACP_02900 (rnr)
Transfer RNA biogenesis [BR:
ncj03016
]
Prokaryotic type
tRNA degradation factors
MCACP_02900 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
OB_RNR_1st
OB_HELZ2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
WXJ93830
LinkDB
All DBs
Position
276762..279038
Genome browser
AA seq
758 aa
AA seq
DB search
MDKEELLSLMRTRSYRPMTAAELMAALGADDEEAFRELLHSLEQEGYIVRTRKDKYGLPE
KMGLVSGLLQASTKGYAFVVPREKEQADVYISALNLNGAMHGDFVLARILPGTTGRRQEG
EIIRVLQRANKRVVGTFTAAGHLSFVVPDDARLNQDILIPPGNSQGAREKDKVVVEITRW
PEARRNPEGRVVEILGQAGRPGVDVLSIIKKYDLESEFPPEVLREAEGLSKGFGPPELAG
RRDLREWRLVTIDGADARDLDDAVSVELLPDGNYLLGVHIADVSFYVREGSALDREAFNR
GTSVYFVDRVIPMLPPRLSNDLCSLNAGEDRLAVTALMTITPRGTVKSYELFPSIIRVRE
RMTYDAVRRILEDGDPELLERYRELVPDFRLMARLAAILRQRREKRGAIDFDFPEARVEL
DDQGLPVAVIPRRRSVAEGIIEEFMIAANEVVARHLYELAVPAVYRVHEEPAPDKMEELN
KFLAFFGLQIRPGRDGRVKPRAFQEILLNVKGRPEERVISTVMLRSMMHARYAGQCLGHF
GLASPYYCHFTSPIRRYPDLVVHRILRETWSPAGLTADRMAKLDAFVALAAARASEREKV
AEEAEREALDLKKVQYMERHVGATFPGVISGVVPYGFFVELENTVEGLVHVSTLTDDYYH
YQEDQLALVGEHTGRVFRIGQPVEVVVARANVEARQVDFELVKPEAAVETGRGPVAAMKG
RRKVKSRRKETVPVGSKTGSKICGQNRRKRNKAPRGRL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaagaattattgtccctcatgcgtacccgttcttaccggcctatgacggcg
gcggagctcatggccgccctgggagcggacgatgaggaagccttccgggaattgctccat
tccctggaacaggagggttatattgttcgcacccgcaaggataaatacggcctgccggaa
aagatgggcctggtcagcggcctcctccaggcttcaacaaaaggttacgcctttgtcgtg
ccccgggaaaaggagcaggccgatgtttatatcagcgcccttaatctcaacggggccatg
cacggggatttcgttctggccagaattttgcccgggaccacggggcgccggcaggaggga
gaaatcatccgcgtcctgcagcgggccaacaagcgagtagtgggaacctttaccgctgcc
ggtcatttgagctttgtagtgcccgatgatgcccgtttaaaccaggatatccttattcct
cccggtaattctcagggtgccagggaaaaggataaagtcgtcgtggaaattacccgctgg
ccggaggcccggcgcaatcccgagggccgggtggtggaaatcctgggccaggcgggccgg
ccgggagtggacgttttaagcattatcaaaaagtacgacctggagtcggagtttccccct
gaggttttacgcgaagccgaaggcttaagcaaagggttcggccccccggagctggccggg
cgccgggacctgcgggaatggcgtctggtaaccattgacggtgctgatgcccgcgatctg
gatgacgccgtgtccgtggagcttttacccgatggtaattacctcctgggagtacatatt
gccgacgtcagcttctacgtccgggaaggcagtgccctggaccgggaggccttcaaccgg
ggcacgagcgtctactttgtggaccgggttatccccatgctgccgccccggttatccaat
gacctctgttcgttaaatgccggggaagaccgcctggccgtaacggccctgatgacgatc
acgccgcggggtacagtaaaaagttacgagcttttcccttcaattatccgcgtgcgcgag
cgcatgacctacgacgctgtccggcgcatcctggaagacggcgatccggaactgctggag
cgttaccgggaactggtgccggatttccggctcatggccaggctggcggcaattttgcgg
cagcggcgggagaaacggggggctattgattttgatttcccggaggccagagtggaactt
gacgatcagggcctgccggtggccgttatcccgcgccggcgttcggtggccgaaggaatt
attgaagaatttatgatcgccgccaatgaagtggtggcccggcacctgtacgagctggcc
gttcctgccgtttaccgcgtccacgaggaaccggcgccggataagatggaagaactgaat
aagtttctggccttctttgggctgcagatcaggcccgggcgggatgggcgcgttaaaccc
cgcgctttccaggaaatcctccttaacgtcaaagggcggccggaggagcgggtcatcagt
accgtcatgctgcgttccatgatgcacgcccgttacgccggccagtgcctgggacacttt
ggcctggcctcgccttactactgccattttacctcgcccatccgccgctacccggacctg
gttgtgcaccgcattttgcgggagacctggtccccggcaggtttaacggcggaccgcatg
gcgaaactcgacgcctttgtggccctggctgcggcccgggcttcggaaagggaaaaggtg
gctgaggaagccgagcgggaagccctggatttgaagaaggtccagtatatggaacgccat
gtgggagcgacctttcccggagttatcagcggtgtggtaccctatggcttctttgtggaa
ttggaaaataccgtcgaaggcctggtccatgtatctaccctgactgacgattattaccat
tatcaggaagaccagctggccctggtaggcgagcacaccggcagggtattccgcatcggc
cagccggtagaagtggtggtggcgagggccaacgttgaggcccggcaggtggattttgag
ctggtcaaaccggaagctgcggtagagaccgggcgcgggccggtagccgcaatgaaaggc
cggcggaaggttaaatcgcgaagaaaggaaactgtcccggtggggagcaagaccgggagt
aaaatttgcggccagaaccggcgtaaacggaataaagccccccggggccgtttataa
DBGET
integrated database retrieval system
