Neomoorella carbonis: MCACP_20690
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Entry
MCACP_20690 CDS
T11049
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ncj Neomoorella carbonis
Pathway
ncj03030
DNA replication
ncj03430
Mismatch repair
ncj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCACP_20690 (dnaE)
03430 Mismatch repair
MCACP_20690 (dnaE)
03440 Homologous recombination
MCACP_20690 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncj03032
]
MCACP_20690 (dnaE)
03400 DNA repair and recombination proteins [BR:
ncj03400
]
MCACP_20690 (dnaE)
Enzymes [BR:
ncj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCACP_20690 (dnaE)
DNA replication proteins [BR:
ncj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCACP_20690 (dnaE)
DNA repair and recombination proteins [BR:
ncj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCACP_20690 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DACNV
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WXJ95576
LinkDB
All DBs
Position
complement(2001423..2004971)
Genome browser
AA seq
1182 aa
AA seq
DB search
MNSFVHLHVHSEYSLLDGAGRIKDLVRAAREMGMPALALTDHGVMYGAVDFYKAAREEGI
KPIIGCEVYVAPRSRHDREPHRDDYQYHLVLLAADATGYRNLAALVSAAYLEGFYYKPRV
DRELLSRHSQGLIALSACLAGEVPGWLLKDQEDKAYEAAAWLKEVFGRENFYLELQDQGL
AEQRKINRRLIELGNRLSLPLVATNDVHYVSQDQARVHDILLCIQTGKTLNDPNRLRFPN
TQFYLKSPGEMAALFTEVPSALTNTLAIAERCNFDFTFGQLHLPAYRVPDGEDTASYLRR
LCYEGFRRRYPRDDGTARQRLDYELAIIEQMGYPGYFLIVWDIVNFARRRGIPVGPGRGS
AAGSLVAYCLGITAVDPLRYNLLFERFLNPERVSMPDIDIDFCFERRDEVIQYVQEKYGR
EHVAQIITFGTMAARGAVRDVGRVLGMPLSEVDRIARLVPLELGMTLDRALAITPELKES
YESSAAVRELLDTARALEGMPRHASTHAAGVVITQEPLTHYLPLQKNGEAVTTQFPMQVV
EELGLLKMDLLGLRTLTVIDRARRAVRLNYGRDLDLENLPLDDEATYRLLASGETSGIFQ
LESSGMRAILKELKPERFEDIVALVALYRPGPLGSGMVEDFIERKHGLKPITYLHPALEP
ILKDTYGVILYQEQVMRIASELAGFTLGQADLLRRAMGKKKPEVLAAQREHFLAGAVKKG
LPEEIALKIFELMEYFAGYGFNASHSAAYALVAYQTAYLKAHYPAELMGALLSSVAEHLD
KMGPYLTECQRLGIKVLPPDVNESGVDFTIAGGRIRFGLAAVKNVGRAAVEAIIAAREAG
GPFTSLLDFCRRVDSRLANKRVVESLIRCGAFNSLHPNRRQLLAILDSCFELAAQRQEER
RSGQISLLDMVPEEVNEPPLPDLSDFSRADILAMEKELLGFYLSGHPLEPYAETLQQIVS
HTLADLSEIPDGSQVVLGGLVSGLRRLVTRKGEPMAVLTLEDFSGQGEVVLFPRVYNQSR
TWLAPDRAVIIYGHTDKQEEGVQVLADQVKPVRVGPGEAGTPAGGLPVETSPAGAVGRER
ACGQETVAAPPAHTGSGKAGERRSGRRLYLKLTDKDQREALQDILTAFPGDCPVYLHLSS
EGRTFILHRRLWVEPVPALLASLARLLGGQDKVKLVPEKLIN
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctttgtccacctccatgtccacagtgaatacagcctcctggacggagccggc
cgcattaaagatctggtcagggctgccagggagatgggcatgcccgccctggccctgacg
gaccatggtgtcatgtacggggccgtggacttctataaagcagcccgggaagaagggatc
aagcctattattggctgcgaggtttatgtagcaccccgttcccgccatgaccgggagccc
caccgggacgactaccagtaccacctggtcctcctggctgccgatgctaccggttaccgg
aatctggcggccctggtttcggccgcctacctggagggcttttattataaaccgcgggtg
gaccgtgaacttttgagccgccacagccagggcctcattgctttaagtgcctgcctggcc
ggcgaggtgccgggctggcttttaaaggaccaggaagataaggcctatgaagctgctgcc
tggctaaaggaggtctttggccgcgagaatttctacctggaactccaggaccagggcctg
gcggaacagcgtaagataaaccgccgtctcatcgaactggggaatagattaagtttaccc
ctggtggccaccaatgatgttcattatgtctcccaggaccaggctcgcgtccatgatatc
ctcctctgtatccagactggtaaaacccttaacgatcccaaccgcctccgttttcccaac
acccagttttatttaaaaagccctggagaaatggcggccctttttaccgaagtgccatct
gctttgaccaataccctggccattgccgagcgttgtaacttcgacttcacctttggccag
ctgcacctgccggcctaccgggtaccggatggggaggatacggccagttacctgcgccgc
ctctgctatgagggtttcaggaggcgttacccccgggatgacggtacggcgcggcagcgc
ctcgactatgaactggccattattgaacaaatgggttacccgggctatttccttattgtc
tgggatatagtcaattttgcccgccggcgaggtatcccggtagggccgggaaggggctcg
gctgccggcagcctggtggcctactgcctggggataaccgccgtagaccccctgcgttat
aacctcctctttgagcgctttctcaacccggagcgggttagtatgcccgatatagatatc
gatttttgctttgagcgccgggacgaggttattcagtatgttcaggaaaaatacggcagg
gagcacgtggcccaaattattacctttggcaccatggccgcccggggtgctgtcagggat
gtaggccgggtcctggggatgcccttgagcgaagtcgaccggattgccaggttggtcccc
ctggagctgggcatgaccctggaccgggccctggccataacgccagaactaaaggaaagc
tatgaaagcagcgcggccgtacgggagctcctggatacggcccgggccctggagggtatg
ccccgccatgcctcaacccatgcggcgggggttgttatcacccaggaacctctaacccac
tacctgcccctgcaaaaaaacggcgaggcagtgacgacccagtttcccatgcaggtagtg
gaagaactgggccttttaaaaatggatctcctgggtcttcgcaccctgacggtaatcgac
cgggcccgccgggcagtcaggctgaactacggccgcgacctggatctggaaaacctgccc
ctggatgacgaggctacctaccggctcctggcgagtggagaaaccagcggcatcttccag
ctggaaagcagcggcatgcgggccatcttaaaggaattaaaaccggaacgttttgaggat
attgtcgccctggtagccctataccgtcccggccctctgggtagcggcatggtggaggat
tttatagagcgcaagcacggcctaaagcccattacttacctccacccggccctggaaccc
atcttgaaggatacctacggcgtcattctttaccaggagcaggtcatgcgtattgccagc
gaactggccggcttcaccctgggccaggctgacctcttacgccgggccatgggcaaaaag
aagccggaggtcctggcggcccagcgtgagcatttcctggccggcgctgtcaaaaaaggc
cttcctgaggagatcgccctcaaaatctttgaactcatggaatactttgccgggtacggt
tttaatgccagccactcggcagcctatgccctggtggcttaccaaacggcctatctcaag
gcccattatccggcggaactgatgggcgccctgctgtccagtgtggccgaacacctggac
aaaatggggccttatctcaccgaatgtcagcgtctggggatcaaggtcctcccacctgat
gtcaacgaatccggtgtggatttcaccatcgccggcgggcgcatccgcttcggcctggca
gctgtaaaaaatgtcggccgtgccgccgtggaagccatcattgccgcccgggaggccggt
ggtccctttacttctctcctggacttctgccgccgggtggactcaaggcttgccaacaaa
agggtggttgagagcctcatccgttgcggcgccttcaactccctgcaccccaaccggcgg
caactgctggctatcctggattcctgttttgagctggcggcccagcgccaggaggaacgc
cgcagcggccagatttctttactggatatggtaccggaagaagttaacgagccgcccctg
cccgatctgtccgatttttcccgtgccgacatcctggctatggaaaaggaactcctgggc
ttctacttaagcggtcaccccctggagccctatgcagaaaccctgcagcagatcgtttcc
cataccctggctgatctttccgaaatacccgacggcagccaggttgtccttggcggtctg
gtaagcggtttgcgtcgcctggtgacccgcaagggtgaacccatggccgtcctcaccctg
gaggatttcagcggccagggggaagtcgtccttttcccccgtgtctacaaccagagccgc
acatggctcgcccccgaccgggcggttattatttatggccatactgataaacaggaggaa
ggggtccaggtcctggccgaccaggttaaaccggtaagggtaggccccggcgaggcggga
acaccggccggcggtcttccggtcgagacgtcgccggccggagcagtgggccgggagcgg
gcatgcggccaggagacagtggcagcgccgcctgcccataccggcagcgggaaggcgggg
gagcgcaggtccggccggcgtttgtacctgaagttgacggacaaagatcagagggaagcc
ctgcaggatattttgacggcctttccaggtgactgcccggtgtacctgcacttgagcagc
gaggggcggacttttattcttcaccgccggctgtgggttgaaccggttccggccctgctg
gcaagtttggcccgcctgttaggtgggcaagataaagttaaattagtaccggaaaaattg
ataaattaa
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