Neomoorella carbonis: MCACP_27050
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Entry
MCACP_27050 CDS
T11049
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ncj Neomoorella carbonis
Pathway
ncj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCACP_27050 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncj03021
]
MCACP_27050 (rho)
03019 Messenger RNA biogenesis [BR:
ncj03019
]
MCACP_27050 (rho)
Transcription machinery [BR:
ncj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCACP_27050 (rho)
Messenger RNA biogenesis [BR:
ncj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCACP_27050 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
NACHT
bpMoxR
AAA_22
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
WXJ96206
LinkDB
All DBs
Position
complement(2670018..2671295)
Genome browser
AA seq
425 aa
AA seq
DB search
MHTAELESKTMVELYRIARELNLSGYYRLRKKELVFEIAKALAQKEQQEKEKEEQLQAQG
ILEILPDGYGFLRPFGYIPSGDDIYISPSQIRRFDLRTGDKVAGLVRPPKDNERFFALLR
VEKVNGENPETSPERLHFDALTPIYPYERYTLETENGDPSTRIIDLIAPLGKGQRALIVS
PPKAGKTVLLKKIANAITTNYPDVELIILLIDERPEEVTDIERSVRGEVVSSTFDELPEN
HVKVADMVLERAKRLVEHKKDVVVLLDSITRLARAHNLVVPPSGRTLSGGVDPTALYKPK
RFFGAARKVEEGGSLTIVATALIETGSRMDEVIFEEFKGTGNMELILDRKLAERRIFPAI
DVKRSGTRREELLLSPEELELVWNFRRVTSGMGPVEVAEVLIESMQKTKSNKDLLRALPA
LFPKT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttgcatactgccgagttagaaagcaagaccatggtcgagctttaccggatagcccgggag
ctcaatttaagcggctactaccgcctgcgcaagaaagagctggtctttgaaattgccaag
gccctggcccagaaggagcagcaggaaaaggaaaaggaagagcaactgcaggcccagggc
attctggagatcctgccggatggctacggcttcttacgccccttcggctacatacccagc
ggcgacgatatctatatctccccttcccagatccgccgcttcgacctgcgcacgggagac
aaggtagccggcctggtccgccctccgaaggataacgagcgttttttcgccctgctgcgg
gtagagaaggtcaacggggaaaacccggagacatcaccggaacggctgcactttgatgcc
ctgacgcccatttatccttacgaacgttataccctggagacggagaacggcgatccgtct
accaggattatcgacctgattgctcccctgggcaaaggccagcgcgccctgatcgtttcc
cctcccaaggccggcaagaccgtgctgctgaaaaaaatcgccaatgccatcactaccaac
tatcccgatgttgagctgataattttattaatcgacgaacggcccgaagaagtcaccgac
attgaacgctcggtgcggggcgaggtggtaagctccacttttgacgaactgccggagaac
cacgtcaaggtggccgatatggttctggaacgggccaaacgcctggtggagcataaaaaa
gatgttgtcgtcctcctggacagtatcacccgcctggcccgggcccacaacctggtcgtc
cctcccagcggccgcaccctttccggcggcgttgatccaaccgccctctataaacccaag
cgtttcttcggcgctgcccgcaaggtggaagagggcgggagcctcaccattgtggcgacg
gccctgattgaaaccgggagccgcatggatgaagttatctttgaagaattcaaaggaacg
ggcaatatggaactcatcctggaccggaagctggccgaacgtcgcattttcccggctatt
gacgtcaagcgctccggcacgaggcgggaagaattgttgttaagccccgaagagctggag
ctggtatggaatttccggcgggtcaccagcggtatgggaccggtggaagtggccgaggtt
ttaattgaatccatgcaaaagaccaaaagcaacaaagacctcctgcgcgccctgccggcc
ttgttccccaagacttga
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