Candidatus Nitrosotenuis chungbukensis: QVH35_02890
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Entry
QVH35_02890 CDS
T09234
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nck
Candidatus Nitrosotenuis chungbukensis
Pathway
nck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QVH35_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nck03400
]
QVH35_02890
Enzymes [BR:
nck01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QVH35_02890
DNA repair and recombination proteins [BR:
nck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QVH35_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WKT58389
LinkDB
All DBs
Position
complement(426871..427554)
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AA seq
227 aa
AA seq
DB search
MIQPSVSKINKKIIQCQKCPRLSNYIKNVAHVKVKRYTHEKYWGKPLSGFGDPKAKLLII
GLAPAAHGGNRTGRMFTGDSSGDWVAKVLYDNGFATKSTSLKKNDGFELINAYITAAVKC
APPQNKPTKEEINTCSDYLYEELFLLKNVKVIICLGKIAFDALKSILGVKQQKFFHGNNF
SYGGKTILCSYHPSRQNTQTGRLRWDQWNKIFLEAKSMLSDKSVFSF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgatacaaccatcagtctctaaaataaataaaaaaatcatacagtgtcaaaaatgtcct
aggctttctaattatatcaaaaatgtggcacatgttaaagtaaaacgatacactcatgaa
aaatactggggaaaaccattgagtggttttggtgatccaaaagcaaaattactcattata
ggattggcgcctgcggctcacggcggtaatcgaacagggaggatgtttaccggtgatagt
tctggggattgggtagccaaagttctatacgataatggctttgcaacaaaatccacaagt
ctgaaaaaaaatgatggctttgagctgattaatgcgtatatcactgcagcagtaaagtgt
gcaccaccacaaaacaaacctaccaaagaagaaatcaacacttgctctgattatctttat
gaggaattgtttcttttaaaaaacgtcaaagtgataatatgtcttggtaagatagcattt
gatgccttaaaatccatacttggagttaagcagcaaaaattttttcatggtaataatttt
tcatatggcggcaaaaccatactttgcagctatcatccaagtagacagaatacccagaca
ggtaggctgagatgggatcaatggaataaaatatttttagaagcaaagtcgatgttgagt
gataaatcagtcttttcattttaa
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