KEGG   Candidatus Nitrosotenuis chungbukensis: QVH35_03090
Entry
QVH35_03090       CDS       T09234                                 
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nck  Candidatus Nitrosotenuis chungbukensis
Pathway
nck03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    QVH35_03090 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nck03021]
    QVH35_03090 (tfb)
Transcription machinery [BR:nck03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     QVH35_03090 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     QVH35_03090 (tfb)
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_C Sigma70_r4 HTH_11 Cyclin_N HTH_AsnC-type HTH_Tnp_ISL3 HEF_HK Sigma70_r4_2 zf-CCHC_5 Auto_anti-p27
Other DBs
NCBI-ProteinID: WKT58417
LinkDB
Position
453941..454852
AA seq 303 aa
MTQTSRSSDRCPRCSKGSMLTDGSTGEMFCNTCGFVATERVEEEGPEWRSFSKEEGENRT
RTGTPTSLAMHDMGLATIIGQADKDASGKPLTSSMKSTIERLRTWDSRSQVHEPVDRNFR
QAFSELDRLKDKLALSDAVIEKTAYIYRKALDKGLVRGRSIPGLVAAALYAACRNTETPR
TLTDVANGINIKRKDVARCYRLLLRELELKMPVVDPIKGVARIASIADLSEKTKRKALEF
LKEASRIEVSAGKDPMGLAAAALYLACVMLGENKTQKDIAQAAGVTEVTIRNRYKGLKEA
LKL
NT seq 912 nt   +upstreamnt  +downstreamnt
atgacacaaacttcacgaagtagcgatagatgtccacgttgctctaaaggatcaatgtta
acagatggaagtacaggagagatgttttgtaatacctgcggttttgtcgcaaccgaaaga
gttgaggaagaaggaccagaatggcgttcattttcaaaagaagaaggagagaaccgaact
agaacgggaaccccaacttcgcttgcaatgcacgatatgggccttgcaaccataatcggt
caggcagacaaggacgcatcgggaaagccccttacatcctcaatgaaaagcaccattgag
agactccgaacttgggatagccgaagccaggtacacgaaccagtagacaggaactttaga
caggcattcagcgagttagacaggctaaaagacaagttggcactatctgatgccgtaatc
gaaaagaccgcctatatctacagaaaggcacttgataaaggccttgttagaggtcgctca
attccaggactagttgctgcagcgctatatgcagcgtgcagaaatacagagactccaaga
acgcttacagatgtggcaaatggaatcaacatcaagcgaaaggatgtagcaagatgttac
agattgcttctcagggagctagaactgaaaatgccagtagtagatccaatcaagggagtt
gcaaggattgcaagtattgcagacctaagcgagaagacaaaaagaaaggcacttgaattc
ctaaaggaagctagccgtattgaggtatctgctggaaaggatccgatgggccttgcagca
gcagcactttacttggcttgtgtgatgttaggagagaacaagactcagaaagacatcgct
caagcagcaggtgtaacagaagtaacaatccgaaatcgatacaagggtcttaaagaagca
ctaaaactctaa

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