Candidatus Nitrosotenuis chungbukensis: QVH35_07495
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Entry
QVH35_07495 CDS
T09234
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nck
Candidatus Nitrosotenuis chungbukensis
Pathway
nck03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QVH35_07495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nck03000
]
QVH35_07495
03021 Transcription machinery [BR:
nck03021
]
QVH35_07495
Transcription factors [BR:
nck03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
QVH35_07495
Transcription machinery [BR:
nck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
QVH35_07495
RNA polymerase III system
TFIIIB
QVH35_07495
RNA polymerase I system
SL1/TIF-1B
QVH35_07495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
B3_4
Motif
Other DBs
NCBI-ProteinID:
WKT57265
LinkDB
All DBs
Position
complement(1097922..1098482)
Genome browser
AA seq
186 aa
AA seq
DB search
MPQTKPIVSIENVVASASVDQKMDLNEITRNFPDVEYHPDQFPGLVFRLKSPKTATLIFT
SGKMVCTGAKSEEMARSAVKSVVQKLRKGGIKVKKDAVVDIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLEEK
DLMIYD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaagccgattgtaagtattgaaaatgtggttgcttctgcatcggtggat
cagaaaatggatctaaatgagattacccgtaattttccggatgtagaatatcatccggat
cagtttccaggattagtatttcgtctaaaaagtccaaagacagctactttgattttcaca
tcaggcaagatggtatgcactggtgccaaatcagaagaaatggcaagaagtgcagtaaaa
tcagttgtccaaaagctaagaaagggaggaatcaaagtgaaaaaggacgcagtagtcgac
atccaaaacatagttgcgtcgattaacctgggaggcaagattcacctagagcaggcagca
agaaccctcccaagaagcatgtacgagccagaacagtttccaggattaattcacagaatg
cttgacccaaagacagtgatcttgcttttctcatcaggaaagctagtctgcacaggagca
aaaaaagagcctgacgtgtacagatccgtaaacaacctacattcgctactagaagaaaaa
gatctaatgatttacgattag
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