Nitrosopumilus cobalaminigenes: C5F47_00375
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Entry
C5F47_00375 CDS
T06688
Name
(GenBank) endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5F47_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncl03400
]
C5F47_00375
Enzymes [BR:
ncl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C5F47_00375
DNA repair and recombination proteins [BR:
ncl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C5F47_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QLH02150
UniProt:
A0A7D5M161
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All DBs
Position
complement(71257..72096)
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AA seq
279 aa
AA seq
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MQVGCHVSISGSIDKSVDNAVERECSAFQIFTRNPRGWHAKDLTKEDIDNFKSKLKASKI
DRFATCAHMPYLPNLATPKEDGFEKSVKTLIGESERCAQLGIPYLVTHLGSHLGTGDEAG
IKKLVEGLTKAGKAKNDVMILLENTAGQKNSIGSEFEQLGEIFKQLKPAKKFGVCLDTCH
AFVAGYDLRTDKDVKNTFSQFDKHVGIDNLKILHLNDARGELGCNLDRHYHLGLGGIGEK
GISAVVKFANKKKIPIILETPIDDDRDDFENVKIAKEFA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaggatgtcatgtttcaatttctggttcaattgataaatctgtagataatgct
gttgaaagagaatgttctgcatttcaaatttttacaagaaatccaagaggttggcatgca
aaagatttgaccaaagaagacattgataattttaaatcaaaactaaaggcaagtaaaatt
gatcgatttgcaacatgtgcacatatgccatatttgccaaatcttgcaacaccaaaagaa
gatgggtttgaaaaatctgttaaaacattaattggtgaatctgaaagatgtgcacaatta
gggattccatatttagtaactcatcttggtagtcatctaggaactggagatgaagctgga
attaaaaaactagtcgaaggtttgacaaaagctggaaaagcaaaaaatgatgtaatgata
ctattagaaaatactgcaggacagaaaaattctattggttctgaatttgaacagttggga
gaaattttcaaacaactaaaacctgcaaagaaatttggcgtttgtttagatacttgtcat
gcatttgttgcaggatatgatttaagaacagataaggatgtaaagaatactttttcacag
tttgataaacatgtaggaatagataatttgaaaattcttcatctaaatgatgcaagaggt
gaactagggtgcaatcttgatagacactatcatttaggattaggaggtatcggagaaaaa
ggaatttcagctgtagtaaagtttgcaaataagaaaaaaattcctataattttagagact
ccaattgatgatgaccgggatgactttgaaaatgtcaaaatagcgaaggaatttgcgtag
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