Nitrosopumilus cobalaminigenes: C5F47_00495
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Entry
C5F47_00495 CDS
T06688
Name
(GenBank) recombinase RecA
KO
K04482
DNA repair protein RAD51
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03440
Homologous recombination
ncl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C5F47_00495
03460 Fanconi anemia pathway
C5F47_00495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncl04131
]
C5F47_00495
04121 Ubiquitin system [BR:
ncl04121
]
C5F47_00495
03400 DNA repair and recombination proteins [BR:
ncl03400
]
C5F47_00495
Membrane trafficking [BR:
ncl04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
C5F47_00495
Ubiquitin system [BR:
ncl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
C5F47_00495
DNA repair and recombination proteins [BR:
ncl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
C5F47_00495
RecA family proteins
C5F47_00495
FA (Fanconi anemia) pathway
Other FA pathway factors
C5F47_00495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
RecA
ATPase_2
AAA_24
Zot
AAA_25
AAA_22
DnaB_C
AAA
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
DAP3
DEAD
nSTAND3
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QLH03731
UniProt:
A0A7D5M1P2
LinkDB
All DBs
Position
92995..93654
Genome browser
AA seq
219 aa
AA seq
DB search
MISTGLQKLDQFLSGGIPDSVIVDIFGENGTGKTLLLLQLLINSIKNGGNVLYLDTTGGF
RPERIIEIQKESEIEINLLEKITVSRITNTSEQIKSVNNIISNNFSLIVIDNITDLFSYE
YQNDESTFKKNSLFMKYMHNLSNFAITKKIPIIITNMIRTSDGKEIENMQNAIDPFTHIK
IHLTKNSSKFHGQIYWALKKENFSYTINKKGLSDTTEDF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaacaggtttacaaaaattagaccaattcttgtcaggaggaattccagatagt
gttattgtagatatttttggtgaaaatggaactggtaaaacactgctattattacaatta
ttaataaattcaataaaaaatggtggaaatgttttgtatttggatacaacaggaggattc
agacctgaaagaatcatagaaattcaaaaagaatctgaaattgaaattaacttacttgaa
aaaataactgtatctagaattacaaatacttcagaacaaatcaaatcggttaacaacatt
atatcaaataatttttctttaatagtaattgataacattacggatttattttcttatgaa
tatcaaaatgatgaatcaacttttaaaaaaaattcattatttatgaaatatatgcataat
ttatcaaattttgctattacaaaaaaaattccaataattattacaaatatgattagaaca
agtgatggtaaagaaattgaaaatatgcaaaatgcaattgatcctttcacacatatcaaa
attcatcttactaaaaattcatcaaaatttcatggtcaaatctattgggcattaaaaaaa
gaaaatttttcatataccattaacaaaaaaggcctttctgacactactgaagatttttaa
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